Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= NC_026242.1 Length=145704 Score E Sequences producing significant alignments: (Bits) Value seq16 105 6e-18 seq1525 102 8e-17 seq912 96.9 3e-15 seq45 96.9 3e-15 seq1960 82.4 7e-11 >seq16 Length=114908 Score = 105 bits (116), Expect = 6e-18 Identities = 73/83 (88%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||||||||||| |||| |||||| | ||||||||||| |||||||||| ||| Sbjct 54381 GCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGGGTTCGATC 54440 Query 39838 CCCGGTGCCCGTATTTCTGATAA 39860 |||||||||||||||| ||| || Sbjct 54441 CCCGGTGCCCGTATTTGTGAAAA 54463 Score = 96.9 bits (106), Expect = 3e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||||||||||| |||| |||||| | ||||||||||| |||||||||| ||| Sbjct 41716 GCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGGGTTCGATC 41657 Query 39838 CCCGGTGCCCGTATTT 39853 ||||||||||||| || Sbjct 41656 CCCGGTGCCCGTACTT 41641 Score = 96.9 bits (106), Expect = 3e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||||||||||| |||| |||||| | ||||||||||| |||||||||| ||| Sbjct 49703 GCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGGGTTCGATC 49762 Query 39838 CCCGGTGCCCGTA 39850 ||||||||||||| Sbjct 49763 CCCGGTGCCCGTA 49775 >seq1525 Length=11351 Score = 102 bits (112), Expect = 8e-17 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||||||||||| |||| |||||| | ||||||||||| |||||||||| ||| Sbjct 1796 GCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGGGTTCGATC 1737 Query 39838 CCCGGTGCCCGTATTT 39853 |||||||||||||||| Sbjct 1736 CCCGGTGCCCGTATTT 1721 >seq912 Length=352595 Score = 96.9 bits (106), Expect = 3e-15 Identities = 67/76 (88%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||||||||||| |||| |||||| | ||||||||||| |||||||||| ||| Sbjct 117958 GCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGGGTTCGATC 117899 Query 39838 CCCGGTGCCCGTATTT 39853 ||||||||||||| || Sbjct 117898 CCCGGTGCCCGTAGTT 117883 >seq45 Length=81829 Score = 96.9 bits (106), Expect = 3e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||||||||||| |||| |||||| | ||||||||||| |||||||||| ||| Sbjct 2244 GCGGGCATGGTCTAGTGGCTATGACGTCTGCCTAACACGCAGAAGATCCCGGGTTCGATC 2303 Query 39838 CCCGGTGCCCGTA 39850 ||||||||||||| Sbjct 2304 CCCGGTGCCCGTA 2316 >seq1960 Length=230972 Score = 82.4 bits (90), Expect = 7e-11 Identities = 62/73 (85%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 39778 GCGGGTATGGTCTAGTGGTTATGGCGTCTGTTTTACACGCAGAAGGTCCCGGGTTCAATC 39837 ||||| |||||| ||||| |||| |||||| | ||||||||||| ||||||||| | | Sbjct 136266 GCGGGCATGGTCCAGTGGCTATGACGTCTGCCTAACACGCAGAAGACCCCGGGTTCGACC 136325 Query 39838 CCCGGTGCCCGTA 39850 ||||||||||||| Sbjct 136326 CCCGGTGCCCGTA 136338 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 466097619097600