Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eimeria_20tenella_20[refseq_20GCF_5F000499545.2_202013-11-06] 4,665 sequences; 51,894,357 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq18 109 5e-19 seq1943 95.1 1e-14 >seq18 Length=557087 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 || |||||| || | || ||| || |||||||||||||| | || || | | || Sbjct 280005 CAGCACCAAGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGACAGCGTCCTTCCATC 280064 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 ||||||||||| || || || || | |||||||| || | ||||| || ||||||||| Sbjct 280065 CTCCAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTC 280124 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | |||||| ||||| | | | | ||||| | ||||| || | ||||| || Sbjct 280125 CTGAATCTTTGCCTTCACATTCTCAATGGTGTCTGATGGCTCCACATCGAGAGTGATGGT 280184 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||||| | ||||||||||| |||||||| Sbjct 280185 CTTCCCCGTGAGGGTTTTCACAAAGATCTGCAT 280217 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 || |||||| || | || ||| || |||||||||||||| | || || | | || Sbjct 280233 CAGCACCAAGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGACAGCGTCCTTCCATC 280292 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 ||||||||||| || || || || | |||||||| || | ||||| || ||||||||| Sbjct 280293 CTCCAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTC 280352 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | |||||| ||||| | | | | ||||| | ||||| || | ||||| || Sbjct 280353 CTGAATCTTTGCCTTCACATTCTCAATGGTGTCTGATGGCTCCACATCGAGAGTGATGGT 280412 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || ||||| | ||||||||||| |||||||| Sbjct 280413 CTTCCCCGTGAGGGTTTTCACAAAGATCTGCAT 280445 Score = 107 bits (118), Expect = 2e-18 Identities = 152/214 (71%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 35524 CAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTC 35583 || |||||| || | || ||| || |||||||||||||| | || || | | || Sbjct 280461 CAGCACCAAGTGAAGGGTGGACTCTTTCTGAATGTTGTAATCAGACAGCGTCCTTCCATC 280520 Query 35584 GTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTC 35643 ||||||||||| || || || || | |||||||| || | ||||| || ||||||||| Sbjct 280521 CTCCAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGATCAGGAGGAATGCCCTCCTTGTC 280580 Query 35644 CATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGT 35703 | |||||| ||||| | || | | || || | ||||| || | ||||| || Sbjct 280581 CTGAATCTTTGCCTTCACATTTTCGATGGTATCTGATGGCTCCACATCGAGAGTGATGGT 280640 Query 35704 TTTACCCGTCAAAGTTTTCACAAATATCTGCATT 35737 || || || | ||| |||||||| ||||||||| Sbjct 280641 CTTCCCTGTAAGAGTCTTCACAAAGATCTGCATT 280674 >seq1943 Length=707543 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 35528 ACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCC 35587 ||||| || | || || ||||| |||||||||||||| | | || | |||| || Sbjct 224027 ACCAAGTGAAGGGTGCTTTCCTTCTGAATGTTGTAATCCGAAAGAGTCCTGCCGTCATCA 224086 Query 35588 AGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG 35647 || ||||| || || || || | |||||||| || | || | || ||||||||| | Sbjct 224087 AGTTGCTTTCCTGCGAAGATAAGACGCTGCTGATCAGGCGGGATGCCCTCCTTGTCTTGG 224146 Query 35648 ATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTA 35707 || || ||||| | || | | |||||| | |||||| || | ||||| ||||| Sbjct 224147 ATTTTCGCCTTCACATTTTCGATGGTGTCGGAAGGTTCCACGTCGAGAGTGATGGTTTTT 224206 Query 35708 CCCGTCAAAGTTTTCACAAATATCTGCATT 35737 ||||| | || ||||| || || |||||| Sbjct 224207 CCCGTAAGGGTCTTCACGAAGATTTGCATT 224236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450767313098200