Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entodinium_20caudatum_20[genbank_20GCA_5F002087855.1_202017-04-12] 37,535 sequences; 81,718,944 total letters Query= NC_001824.1 Length=102653 Score E Sequences producing significant alignments: (Bits) Value seq19433 86.0 4e-12 >seq19433 Length=9611 Score = 86.0 bits (94), Expect = 4e-12 Identities = 125/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 12781 ATGGTCATGCGACTAGGAAAGGCATGTGGGTTAATGATTAAATCAGGTACTATGCCATCT 12840 |||||||| || || |||| ||||| || || || || | ||||||| ||| || || Sbjct 8917 ATGGTCATTCGGCTTGGAATAGCATGAGGATTTATAATAATATCAGGTGTTATTCCCTCG 8976 Query 12841 TTAGTGAAAGGCATGTTTTCTTGGGCATAAATCATACCACAGGTACCTTTTTGTGCGGTA 12900 || | |||||||| | ||| || |||| ||||||| || |||||||| | Sbjct 8977 ATATTAAAAGGCATATCTTCCTGTCGATAAGTCATACCTATTGTTCCTTTTTGGCCATGT 9036 Query 12901 AAAGAAGCAAATTTATCTCCTATTTCAGGTATTTTTGGAGATCGTAATTTAATTTTA 12957 |||||||||||||| ||||||| ||| ||| || || || |||| | |||| Sbjct 9037 CTTGAAGCAAATTTATCACCTATTTGAGGAATTCTTATAGTTCTACATTTTACTTTA 9093 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328214586956890