Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entodinium_20caudatum_20[genbank_20GCA_5F002087855.1_202017-04-12] 37,535 sequences; 81,718,944 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq22541 87.8 2e-12 >seq22541 Length=1059 Score = 87.8 bits (96), Expect = 2e-12 Identities = 158/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 20945 GTTTCCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTC 21004 |||||| |||| || ||||| || | || | ||| || |||||||| ||||| || || Sbjct 213 GTTTCCACCTCTGAGTCTGAGGACTAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAATC 272 Query 21005 CGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCAC 21064 || || ||| | ||| || | ||||| || || | || | ||| || || || Sbjct 273 AGCGAGAGTTCTGTTGTCTTCTAATTGTTTTCCTGCGAAGATTAATCTTTGTTGATCTGG 332 Query 21065 GGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTC 21124 || | ||||| ||||| |||||| ||| || | ||| ||| ||| || || Sbjct 333 AGGAATACCTTCTTTGTCTTGGATCTTGGCTTTGACATTTTCGATAGTGTCAGAAGGTTC 392 Query 21125 CGTTTCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175 || | ||| ||||| || ||||| || ||||||||||| |||||||| Sbjct 393 AACATCAAGGGTGATGGTTTTTCCGGTCAAAGTTTTGACAAAGATTTGCAT 443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422066034230060