Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entodinium_20caudatum_20[genbank_20GCA_5F002087855.1_202017-04-12] 37,535 sequences; 81,718,944 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq1132 89.7 7e-13 >seq1132 Length=6054 Score = 89.7 bits (98), Expect = 7e-13 Identities = 119/165 (72%), Gaps = 3/165 (2%) Strand=Plus/Minus Query 73926 CAAAATGGAGATATACTAGTGCTAAATAGACAACCTACTTTACATAAAGCATCAATGATG 73985 || |||||||||||| || | ||||| | |||||||| ||||||||| | || || ||| Sbjct 3788 CAGAATGGAGATATATTATTAGTAAATCGTCAACCTACATTACATAAACCTTCGATAATG 3729 Query 73986 GCTCTTCGAGTTAAAATTAT---GGATGTAAAAACCTTTAAATTTAATCTTGCATGCACT 74042 |||| | || || ||| | | | |||||| |||| ||| || | || | Sbjct 3728 GCTCATAAAGCAAAGATTTTACCAAAAGAAAAAACATTTAGATTACATTATTCAAATTGT 3669 Query 74043 AAACCATATAATGCAGATTTTGATGGAGATGAAATGAATGCTCAT 74087 | |||||||| |||||||||||||||||||||||| |||| Sbjct 3668 GCATGTTATAATGCTGATTTTGATGGAGATGAAATGAATATTCAT 3624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 679495439581200