Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entodinium_20caudatum_20[genbank_20GCA_5F002087855.1_202017-04-12] 37,535 sequences; 81,718,944 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq17428 86.0 5e-12 seq21031 84.2 2e-11 >seq17428 Length=1321 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 18845 GTAGACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCC 18904 || || |||||||| ||||||||||| || | ||| | |||||| || ||||| || Sbjct 742 GTTGATTCCTTTTGGATATTGTAATCGGCAAGAGTTCTATTGTCCTCAAGTTGTTTTCCA 801 Query 18905 GCATAAATAAGTCTCTGCTGATCCACGGGCACGCCCTCTTTGTCGGCAATTTTCTGTTTT 18964 || | || | ||| || ||||| || | || |||||||| |||||| ||| Sbjct 802 GCGAAGATTAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCTTGAATTTTGGCTTTG 861 Query 18965 ACCTGGCCGACAGTATCGCCAGGCTCCGTTTCGACGGTAATGGTTTTACCTGTTAAAGTT 19024 || | | | |||||| ||| || || | || |||||||| || || |||||| Sbjct 862 ACATTTTCAATAGTATCAGAAGGTTCAACATCAAGAGTGATGGTTTTTCCGGTCAAAGTT 921 Query 19025 TTGACAAAAATTTGCAT 19041 ||||| || |||||||| Sbjct 922 TTGACGAAGATTTGCAT 938 >seq21031 Length=1135 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/133 (74%), Gaps = 1/133 (1%) Strand=Plus/Plus Query 18789 TTTGAATTATAATATTTTATTGTTTTCCTCCTCGCAACCTTAACACCATGTGCAACGTAG 18848 ||| ||||| ||| ||| || || ||||||| ||||||||||| | ||||| || | Sbjct 65 TTTTAATTAATATAATTT-TTATTAACCTCCTCTTAACCTTAACACTAAATGCAAAGTCG 123 Query 18849 ACTCCTTTTGAATATTGTAATCCGCCATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCAT 18908 | || ||||||||||| ||||| || | ||| | || |||| ||||| || ||| Sbjct 124 ATTCTTTTTGAATATTATAATCAGCAAAAGTTCCGTTATCTTCCAATTGTTTTCCTGCAA 183 Query 18909 AAATAAGTCTCTG 18921 |||||||||| || Sbjct 184 AAATAAGTCTTTG 196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414383150433790