Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entodinium_20caudatum_20[genbank_20GCA_5F002087855.1_202017-04-12] 37,535 sequences; 81,718,944 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq22541 84.2 2e-11 >seq22541 Length=1059 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| || || || || | || || || || |||||||| |||||||| || || Sbjct 217 CCACCTCTGAGTCTGAGGACTAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAATCAGCG 276 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | ||| || ||| || |||||||| || || | || | | ||||| || ||| Sbjct 277 AGAGTTCTGTTGTCTTCTAATTGTTTTCCTGCGAAGATTAATCTTTGTTGATCTGGAGGA 336 Query 16829 ACGCCCTCTTTGTC--GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCG 16886 | || |||||||| || || ||| || || | | | |||||| || || Sbjct 337 ATACCTTCTTTGTCTTGGATCTTGGCT--TTGACATTTTCGATAGTGTCAGAAGGTTCAA 394 Query 16887 TTTCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 || | |||||||||||||||||||| ||||||||||| || ||||| Sbjct 395 CATCAAGGGTGATGGTTTTTCCGGTCAAAGTTTTGACAAAGATTTGCAT 443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 404902689329650