Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entodinium_20caudatum_20[genbank_20GCA_5F002087855.1_202017-04-12] 37,535 sequences; 81,718,944 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq17428 89.7 6e-13 >seq17428 Length=1321 Score = 89.7 bits (98), Expect = 6e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 42018 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 42077 |||||||| || ||||||||||| ||||| | | ||| |||| || || || ||||| Sbjct 976 TCCTTTTGGATGTTGTAATCAGCAAGAGTTCTGTTGTCCTCTAATTGTTTTCCTGCGAAG 1035 Query 42078 ATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 42137 || | || || || || | || | | || ||||| ||| ||| ||||| | Sbjct 1036 ATTAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCTTGGATCTTTGCTTTGACATTT 1095 Query 42138 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 42197 | | ||||| | ||| ||||||| ||||||||||| || || || || || ||| Sbjct 1096 TCAATGGTGTCAGAAGGTTCTACATCGAGAGTGATGGTTTTTCCTGTGAGTGTTTTAACA 1155 Query 42198 AAGATTTGCATTTT 42211 || ||||||||||| Sbjct 1156 AATATTTGCATTTT 1169 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542957931344400