Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entodinium_20caudatum_20[genbank_20GCA_5F002087855.1_202017-04-12] 37,535 sequences; 81,718,944 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq18875 82.4 5e-11 >seq18875 Length=1247 Score = 82.4 bits (90), Expect = 5e-11 Identities = 137/196 (70%), Gaps = 8/196 (4%) Strand=Plus/Minus Query 39528 TTCTTTTTGTATATTATAATCGGCCAAAACGCGTTC-ATCGTCC---AATTGTTTCCCGC 39583 ||||||||| ||||| |||||||| | | |||| || |||| | |||||| ||| Sbjct 588 TTCTTTTTGGATATTGTAATCGGCAAGA----GTTCTATTGTCCTCAAGTTGTTTTCCGG 533 Query 39584 CAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCGCATATTTTTTGTTTAA 39643 | || ||||| | || ||||| | || | ||||||||||| |||||| ||| | Sbjct 532 CGAAGATTAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCTTGTATTTTGGCTTTGA 473 Query 39644 TCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTT 39703 | | | ||||| | ||| || || | ||| || ||||| || || ||||||| Sbjct 472 CATTTTCGATGGTGTCAGAAGGTTCAACATCGAGAGTGATGGTTTTTCCAGTCAAAGTTT 413 Query 39704 TTACGAAGATCTGCAT 39719 | |||||||| ||||| Sbjct 412 TGACGAAGATTTGCAT 397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347210693062655