Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entodinium_20caudatum_20[genbank_20GCA_5F002087855.1_202017-04-12] 37,535 sequences; 81,718,944 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq19433 93.3 5e-14 seq30826 82.4 1e-10 >seq19433 Length=9611 Score = 93.3 bits (102), Expect = 5e-14 Identities = 114/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 194239 ATACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCTCAAAAAGGAACTTGTGGTAT 194297 || ||| ||||||| ||||||||| ||| || ||||| ||||||||||| ||||| Sbjct 9068 ATTCCTCAAATAGGTGATAAATTTGCTTCAAGACATGGC-CAAAAAGGAACAATAGGTAT 9010 Query 194298 GATTTATTCACAAGAAGATATGCCATTTACAACTTCAGGTATGGTACCAGATATTATTAT 194357 || |||| ||| ||||||||||| |||| | || || ||| ||||||||||| Sbjct 9009 GACTTATCGACAGGAAGATATGCCTTTTAATATCGAGGGAATAACACCTGATATTATTAT 8950 Query 194358 CAATCCAAATTGTATTCCGTCCAGAATGACCAT 194390 ||||| || |||||| | |||||||||| Sbjct 8949 AAATCCTCATGCTATTCCAAGCCGAATGACCAT 8917 >seq30826 Length=3897 Score = 82.4 bits (90), Expect = 1e-10 Identities = 72/87 (83%), Gaps = 2/87 (2%) Strand=Plus/Minus Query 194241 ACCTGAAATAGGGGATAAATTTTGTTCGGGA-ATGGCTCAAAAAGGAACTTGTGGTATGA 194299 ||| ||| |||| |||||||||| |||| || |||| |||||||||| |||||||||| Sbjct 903 ACCAGAATTAGGCGATAAATTTTCTTCGAGACATGG-TCAAAAAGGAGTATGTGGTATGA 845 Query 194300 TTTATTCACAAGAAGATATGCCATTTA 194326 | | | ||||||||||||||||||| Sbjct 844 TAATTCCTCAAGAAGATATGCCATTTA 818 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632192843785800