Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entodinium_20caudatum_20[genbank_20GCA_5F002087855.1_202017-04-12] 37,535 sequences; 81,718,944 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq22541 82.4 6e-11 >seq22541 Length=1059 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 |||||||| |||||||||||||| || || |||||||| ||| | || || || Sbjct 443 ATGCAAATCTTTGTCAAAACTTTGACCGGAAAAACCATCACCCTTGATGTTGAACCTTCT 384 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || ||| ||| | || ||| ||||| || |||||||| | || ||||| Sbjct 383 GACACTATCGAAAATGTCAAAGCCAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 324 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 || ||| | || | || || ||||| | || ||| || ||| | || || |||||| Sbjct 323 CAAAGATTAATCTTCGCAGGAAAACAATTAGAAGACAACAGAACTCTCGCTGATTACAAC 264 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAAA 107785 || |||||||| || || | ||| | || | ||| | |||| ||||| Sbjct 263 ATCCAAAAGGAATCAACTCTTCACTTAGTCCTCAGACTCAGAGGTGGAAA 214 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398694330691615