Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entodinium_20caudatum_20[genbank_20GCA_5F002087855.1_202017-04-12] 37,535 sequences; 81,718,944 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq17428 82.4 7e-11 >seq17428 Length=1321 Score = 82.4 bits (90), Expect = 7e-11 Identities = 141/200 (71%), Gaps = 6/200 (3%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || || ||||| || ||||||||||| | | ||| | | |||||| | || || | Sbjct 514 GTTGATTCTTTTTGGATATTGTAATCAGCGA--GTGTTCTATTGTCCTCTAATTGTTTTC 571 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 | ||| | || | | || || || ||||| || ||||| ||||| ||| ||| || Sbjct 572 CTGCGAAGATTAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCTTGGAT-TTTGGCT 630 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | |||| ||||| | || || || |||| |||| |||||| || |||| | Sbjct 631 TTGACATTTTCAATGGTGTCAGAAGGTTCAACATCGAGAGTGATGGTTTTTCCAGTCAAA 690 Query 133641 GTTTTTACGAAAATCTGCAT 133660 ||||| |||||||| ||||| Sbjct 691 GTTTTGACGAAAATTTGCAT 710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483193985003400