Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entodinium_20caudatum_20[genbank_20GCA_5F002087855.1_202017-04-12] 37,535 sequences; 81,718,944 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq33152 82.4 7e-11 >seq33152 Length=3236 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 |||||||| |||||||||||||| ||||||| | ||| || | || ||||| || || Sbjct 2640 TCCTTTTGGATGTTGTAATCGGCTAAGGTTCTGTTGTCCTCTAATTGTTTACCGGCGAAG 2581 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAGT 35664 || || | || || || | ||||| | || ||||| ||| ||| || || | | | Sbjct 2580 ATTAATCTTTGTTGATCTGGAGGAATACCTTCTTTGTCTTGGAT-TTTGGCTTTGACATT 2522 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| | ||| || || | ||||| |||||||| || | ||||| || Sbjct 2521 CTCGATGGTGTCAGAAGGTTCAACATCTAAAGTGATAGTTTTACCAGTGAGGGTTTTGAC 2462 Query 35725 AAATATCTGCAT 35736 |||||| ||||| Sbjct 2461 AAATATTTGCAT 2450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450582093277800