Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entodinium_20caudatum_20[genbank_20GCA_5F002087855.1_202017-04-12] 37,535 sequences; 81,718,944 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq18875 134 1e-26 seq17428 134 1e-26 seq22541 125 7e-24 seq33152 113 5e-20 seq28501 105 7e-18 seq4855 86.0 6e-12 >seq18875 Length=1247 Score = 134 bits (148), Expect = 1e-26 Identities = 172/232 (74%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC- 134542 ||||| ||||| |||| | || | ||| || || ||||| ||||| ||||||||||| Sbjct 1082 TTTCCACCTCTAAGTCTGAGGACTAAGTGAAGAGTTGATTCTTTTTGGATGTTGTAGTCA 1023 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 || | | | || ||| || | ||||| ||||| ||||| || | || ||||| || Sbjct 1022 GCGAGAGTTCTG-TTGTCCTCTAATTGTTTTCCTGCGAAAATTAATCTTTGTTGATCTGG 964 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATT 134661 || || |||||||| ||||| || || ||||| || | |||| ||||| || | || Sbjct 963 AGGAATACCTTCTTTGTCTTGGATCTTGGCTTTGA-CGTTTTCAATGGTGTCAGAAGGTT 905 Query 134662 CCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | || || ||||| |||||||| || || |||||||| ||||| |||||||| Sbjct 904 CAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTTTTGACGAAGATTTGCAT 853 Score = 123 bits (136), Expect = 3e-23 Identities = 172/236 (73%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCC 134545 || ||||| |||| | || | ||| || || ||||||||||| |||||||| || || Sbjct 395 CCACCTCTAAGTCTGAGGACTAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAATCAGCG 336 Query 134546 AACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGG 134605 | | | || ||| || | ||||| ||||| || || || | || ||||| || || Sbjct 335 AGTGTTCTGTT-GTCCTCTAATTGTTTTCCTGCGAAGATTAATCTTTGTTGATCTGGAGG 277 Query 134606 TATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATG-TGTCGGACGATTCCA 134664 || |||||||| ||||| || || |||||| | | ||||| |||| || | ||| | Sbjct 276 AATACCTTCTTTGTCTTGGATCTTGGCTTTGAC-GTTTTCAATGGTGTCAGAAGGTTCTA 218 Query 134665 CGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTT 134720 | || ||||| ||||| || || || | |||||| ||||| ||||||||||| ||| Sbjct 217 CATCAAGAGTGATGGTCTTTCCAGTAAGAGTTTTGACGAATATTTGCATTTTTTTT 162 >seq17428 Length=1321 Score = 134 bits (148), Expect = 1e-26 Identities = 172/232 (74%), Gaps = 4/232 (2%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC- 134542 ||||| ||||| |||| | || | ||| || || ||||| ||||| ||||||||||| Sbjct 253 TTTCCACCTCTAAGTCTTAGGACCAAGTGAAGAGTTGATTCTTTTTGGATGTTGTAGTCA 312 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 || | | | || ||| || | ||||| ||||| || || || | || ||||| || Sbjct 313 GCGAGAGTTCTG-TTGTCTTCTAATTGTTTTCCTGCGAAGATTAATCTTTGTTGATCTGG 371 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATT 134661 || || |||||||| ||||| || || ||||| || | |||| ||||| || | || Sbjct 372 AGGAATACCTTCTTTGTCTTGGATCTTGGCTTTGA-CGTTTTCAATGGTGTCAGAAGGTT 430 Query 134662 CCACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 | ||||| ||||| |||||||| || || |||||||| ||||| |||||||| Sbjct 431 CAACGTCAAGAGTGATGGTTTTTCCAGTCAAAGTTTTGACGAAGATTTGCAT 482 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || |||||||||| | || | || || || ||||||||||| || ||||| ||| || Sbjct 712 CCACCTCTGAGTCTGAGGACTAAATGAAGAGTTGATTCCTTTTGGATATTGTAATCGGCA 771 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || || ||||| || || || || || | || ||||| || || Sbjct 772 AGAGTTCTATTGTCCTCAAGTTGTTTTCCAGCGAAGATTAATCTTTGTTGATCTGGAGGA 831 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| ||||||||||| |||||| || | || || || | ||| || Sbjct 832 ATACCTTCTTTGTCTTGAATTTTGGCTTTGACATTTTCAATAGTATCAGAAGGTTCAACA 891 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || ||||| |||||||| ||||| |||||||| ||||| |||||||| Sbjct 892 TCAAGAGTGATGGTTTTTCCGGTCAAAGTTTTGACGAAGATTTGCAT 938 Score = 129 bits (142), Expect = 6e-25 Identities = 169/234 (72%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| |||| | || | ||| || || ||||||||||| |||||||| || || Sbjct 940 CCACCTCTAAGTCTGAGGACTAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAATCAGCA 999 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || ||| || | ||||| ||||| || || || | || ||||| || || Sbjct 1000 AGAGTTCTGTTGTCCTCTAATTGTTTTCCTGCGAAGATTAATCTTTGTTGATCTGGAGGA 1059 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| ||||| || ||| |||||| || | ||||| || | ||| || Sbjct 1060 ATACCTTCTTTGTCTTGGATCTTTGCTTTGACATTTTCAATGGTGTCAGAAGGTTCTACA 1119 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTT 134720 |||||||| |||||||| || || | |||||||| || ||||||||||| ||| Sbjct 1120 TCGAGAGTGATGGTTTTTCCTGTGAGTGTTTTAACAAATATTTGCATTTTTTTT 1173 Score = 125 bits (138), Expect = 7e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| |||| | || | ||| || || ||||| ||||| || ||||| || | Sbjct 484 CCACCTCTAAGTCTGAGGACCAAGTGAAGAGTTGATTCTTTTTGGATATTGTAATCAGCG 543 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || | ||||| ||||| || || || | || ||||| || || Sbjct 544 AGTGTTCTATTGTCCTCTAATTGTTTTCCTGCGAAGATTAATCTTTGTTGATCTGGAGGA 603 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| ||||| ||||| |||||| || | ||||| || | ||| || Sbjct 604 ATACCTTCTTTGTCTTGGATTTTGGCTTTGACATTTTCAATGGTGTCAGAAGGTTCAACA 663 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||||||| |||||||| || || |||||||| |||||||||||||| Sbjct 664 TCGAGAGTGATGGTTTTTCCAGTCAAAGTTTTGACGAAAATTTGCAT 710 >seq22541 Length=1059 Score = 125 bits (138), Expect = 7e-24 Identities = 168/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 134484 TTTCCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC- 134542 ||||| |||||||||| | || | ||| || || ||||||||||| |||||||| || Sbjct 214 TTTCCACCTCTGAGTCTGAGGACTAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAATCA 273 Query 134543 GCCAACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGG 134602 || | | | || ||| || | ||||| ||||| || || || | || ||||| || Sbjct 274 GCGAGAGTTCTG-TTGTCTTCTAATTGTTTTCCTGCGAAGATTAATCTTTGTTGATCTGG 332 Query 134603 CGGTATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTC 134662 || || |||||||| ||||| || || |||||| || | ||||| || | ||| Sbjct 333 AGGAATACCTTCTTTGTCTTGGATCTTGGCTTTGACATTTTCGATAGTGTCAGAAGGTTC 392 Query 134663 CACGTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || || |||||||| ||||| |||||||| || || |||||||| Sbjct 393 AACATCAAGGGTGATGGTTTTTCCGGTCAAAGTTTTGACAAAGATTTGCAT 443 Score = 111 bits (122), Expect = 2e-19 Identities = 165/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| |||| | || | ||| || || ||||| ||||| || ||||| || | Sbjct 673 CCACCTCTAAGTCTGAGGACTAAGTGAAGAGTTGATTCTTTTTGGATATTGTAATCAGCG 732 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || | ||| || | ||||| ||||| || || || | || ||||| || || Sbjct 733 AGTGTTCTATTGTCCTCTAATTGTTTTCCTGCGAAGATTAATCTTTGTTGATCTGGAGGA 792 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| ||||| || || |||||| || | ||||| || | ||| || Sbjct 793 ATACCTTCTTTGTCTTGGATCTTGGCTTTGACATTTTCAATGGTGTCAGAAGGTTCAACA 852 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTT 134720 ||||| ||||| || || || || | ||||||||| || ||||||||||| ||| Sbjct 853 TCGAGTGTAATTGTCTTTCCAGTAAGAGTTTTAACAAATATTTGCATTTTTTTT 906 >seq33152 Length=3236 Score = 113 bits (124), Expect = 5e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| |||| | || | ||| || || ||||||||||| |||||||| ||| || Sbjct 2904 CCACCTCTAAGTCTGAGGACTAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAATCGGCA 2845 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | || ||| || | ||||| || || || || || | || ||||| || || Sbjct 2844 AGAGTTCTGTTGTCCTCTAATTGTTTACCGGCGAAGATTAATCTTTGTTGATCTGGTGGG 2785 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| ||||| ||||| ||| || || | ||||| || | ||| || Sbjct 2784 ATACCTTCTTTGTCTTGGATTTTGGCTTTAACGTTTTCGATGGTGTCAGAAGGTTCAACA 2725 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || ||||||||||| | |||||| ||||| |||||||| Sbjct 2724 TCTAAGGTGATAGTTTTACCGGTGAGAGTTTTGACGAAGATTTGCAT 2678 Score = 111 bits (122), Expect = 2e-19 Identities = 165/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| |||| | || | ||| || || ||||||||||| |||||||| ||| | Sbjct 2676 CCACCTCTAAGTCTGAGGACTAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAATCGGCT 2617 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| ||| || | ||||| || || || || || | || ||||| || || Sbjct 2616 AAGGTTCTGTTGTCCTCTAATTGTTTACCGGCGAAGATTAATCTTTGTTGATCTGGAGGA 2557 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 || |||||||| ||||| ||||| |||||| || | ||||| || | ||| || Sbjct 2556 ATACCTTCTTTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTGTCAGAAGGTTCAACA 2497 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTTGTTT 134720 || | ||| || |||||||| || | ||||| || || |||||||| || ||| Sbjct 2496 TCTAAAGTGATAGTTTTACCAGTGAGGGTTTTGACAAATATTTGCATGTTTTTT 2443 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || ||||| |||| | || | || || || ||||||||||| |||||||| ||| | Sbjct 3132 CCACCTCTAAGTCTGAGGACTAAATGAAGAGTTGATTCCTTTTGGATGTTGTAATCGGCT 3073 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| ||| || | ||||| || || || || || | ||| ||||| || || Sbjct 3072 AAGGTTCTGTTGTCCTCTAATTGTTTACCGGCGAAGATTAATCTCTGTTGATCTGGTGGG 3013 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAAT-GTGTCGGACGATTCCAC 134665 || |||||||| ||||| | |||||| | | || | |||| || || || | ||| || Sbjct 3012 ATACCTTCTTTGTCTTGGA-TTTTTGCCTTAACGTTTTCAATGGTATCAGAAGGTTCAAC 2954 Query 134666 GTCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || |||||||| || | ||||| ||||| |||||||| Sbjct 2953 ATCTAAGGTGATAGTTTTACCAGTAAGGGTTTTGACGAAGATTTGCAT 2906 >seq28501 Length=727 Score = 105 bits (116), Expect = 7e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 134511 TGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGCTGT 134570 || || || ||||| ||||| || || || | | | || | | |||| || | ||| Sbjct 429 TGAAGAGTAGATTCTTTTTGTATATTATAATATACTAAAGTTTTATAGTCTTCAACTTGT 488 Query 134571 TTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATTTTT 134630 || || |||||||||| | || ||||| || || || |||||||| |||||||||||| Sbjct 489 TTTCCAGCAAAAATCATTCTTTGTTGATCTGGAGGAATACCTTCTTTATCTTGAATTTTT 548 Query 134631 TGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCGGTT 134690 ||| | | || | ||| ||| | || | || ||||| || ||||| |||||| Sbjct 549 GCTTTAATTTCTTCTATTGTATCGCTTGGCTCTATATCAAGAGTTATCGTTTTTCCGGTT 608 Query 134691 AAAGTTTTAACGAAAATTTGCATTTT 134716 | |||||| || || ||||||||||| Sbjct 609 ATAGTTTTTACAAATATTTGCATTTT 634 >seq4855 Length=2037 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 134489 TCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCC-AA 134547 |||||| |||| ||| || | |||| || |||||||||||||| || || || | || Sbjct 397 TCCTCTTAGTCTCAAAACTAAATGTAAGGTAGATTCCTTTTGAATATTATAATCACATAA 338 Query 134548 CGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTA 134607 | | | | | || || ||| | ||||||||||| || |||||||| || || | Sbjct 337 AGCTCT-ATATTCTTCTTATTGTCTACCTGCAAAAATTAATTTTTGCTGATCAGGTGGAA 279 Query 134608 TGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGT 134667 | |||||| ||||| ||||| ||| || || | || || || | ||| || | Sbjct 278 TACCTTCTACATCTTGTATTTTCATTTTCACAATTTCAATAGTATCCGATGGTTCTACAT 219 Query 134668 CGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 | | || || ||||| || || | ||||| || ||||||||||| || Sbjct 218 CCAATGTGATAGTTTTTCCAGTGAGTGTTTTGACAAAAATTTGCATCTT 170 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505161273388200