Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Entodinium_20caudatum_20[genbank_20GCA_5F002087855.1_202017-04-12]
37,535 sequences; 81,718,944 total letters
Query= NC_027778.1
Length=124244
Score E
Sequences producing significant alignments: (Bits) Value
seq36279 120 2e-22
>seq36279
Length=2667
Score = 120 bits (132), Expect = 2e-22
Identities = 290/434 (67%), Gaps = 10/434 (2%)
Strand=Plus/Plus
Query 19432 AAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAATCGGAAGAAAATGTA 19491
||| | ||||||||||| ||| | || |||||| ||| || || ||||| ||| ||
Sbjct 780 AAAGTCGTAAATGGTCCAGAATTATTTGATAAATTTGTTGGAGAAACGGAAAGAAAAATA 839
Query 19492 CGACGTTTGTTTGCTGACGCTGAAGAAGAACAAAAACGTTTAGGGCGCAAAAGTTC-TTT 19550
| ||| ||||| | ||||| |||| |||||| | | || | ||| | |||
Sbjct 840 AGGGATTTATTTGCCAATGCTGAGAAAGATCAAAAA-GAAAATGGAGATGAAGCTGGTTT 898
Query 19551 GCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGCAAAGAGGTTCTGGT----- 19605
||| | ||| | | |||||| | || | || ||||| ||||||| |||
Sbjct 899 GCATGTAATAGTCTTTGATGAAATTGATTCTATATGTAAAGCAAGAGGTACTGTGACTTC 958
Query 19606 -GTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGTGTTAA 19664
| || |||||| |||| ||| ||| |||||| | | | ||| | || ||||| |
Sbjct 959 AGGAACTGGAGTTAATGATTCTGCTGTAAATCAATTATTAACTAAAATTGATGGTGTCGA 1018
Query 19665 CCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGACAGCGC 19724
| ||| ||||| ||||||| || ||||||||||| || |||||||| ||
Sbjct 1019 TTCTTTAAATGATATTATAGTTATAGGTATGACTAATAGGAAAGATTTAATAGATGAAGC 1078
Query 19725 CTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAAT-TAACTTACCCGATGAATGTG 19783
| | ||| |||| || | || ||| || | || ||| | | |||| || |||||| |
Sbjct 1079 CATTTTAAGACCTGGGAGATTAGAATTACATATAGAAGTATCACTT-CCTGATGAAAAAG 1137
Query 19784 GACGTGTGGAAATTTTAAACATACATACATCAACCATGCGACAAAATAACCTTTTAAATG 19843
| ||| | |||| || || ||||| || || ||| | ||||||| | ||| |||
Sbjct 1138 GCCGTTTACAAATATTTAATATACACACCAAAAAAATGAGGGAAAATAAAGTATTAGATG 1197
Query 19844 ACGATGTAGATCTA 19857
| ||||||||| ||
Sbjct 1198 ATGATGTAGATTTA 1211
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 397274180647675
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |