Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Entodinium_20caudatum_20[genbank_20GCA_5F002087855.1_202017-04-12] 37,535 sequences; 81,718,944 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq18875 111 1e-19 seq33152 109 4e-19 seq17428 100 2e-16 seq22541 89.7 4e-13 >seq18875 Length=1247 Score = 111 bits (122), Expect = 1e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| ||||| | || | |||||| || ||||||||||||||||| Sbjct 402 TTGCATACCACCTCTAAGTCTGAGGACTAAGTGAAGAGTTGATTCCTTTTGGATGTTGTA 343 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| |||||| | | ||| || | || || || || ||||| || | || ||||| Sbjct 342 ATCAGCGAGTGTTCTGTTGTCCTCTAATTGTTTTCCTGCGAAGATTAATCTTTGTTGATC 283 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTCGGCGG 44282 || ||| | |||||| || || ||||| |||| | | || | |||||||| | | Sbjct 282 TGGAGGAATACCTTCTTTGTCTTGGATCTT-GGCTTTGACGTTTTCAATGGTGTCAGAAG 224 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | || || |||||||| || || || || ||||| |||||||| Sbjct 223 GTTCTACATCAAGAGTGATGGTCTTTCCAGTAAGAGTTTTGACGAATATTTGCAT 169 Score = 100 bits (110), Expect = 2e-16 Identities = 165/236 (70%), Gaps = 4/236 (2%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| ||||| | || | |||||| || || |||||||| ||||| Sbjct 630 TTGCATACCACCTCTAAGTCTGAGGACTAAGTGAAGAGTTGATTCTTTTTGGATATTGTA 571 Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 |||||| ||||| | | ||| || || || || ||||| ||||| || | || ||| Sbjct 570 ATCGGCAAGAGTT--CTATTGTCCTCAAGTTGTTTTCCGGCGAAGATTAATCTTTGTTGA 513 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281 |||| ||| | |||||| || || ||| || || | || | |||||||| | Sbjct 512 TCTGGAGGAATACCTTCTTTGTCTTGTATTTTGGCTTTGACATTTTCGATGGTGTCAGAA 453 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||| || || | || || || ||||| || | || || |||||||||||||| Sbjct 452 GGTTCAACATCGAGAGTGATGGTTTTTCCAGTCAAAGTTTTGACGAAGATTTGCAT 397 Score = 96.9 bits (106), Expect = 2e-15 Identities = 164/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| ||||| | || | |||||| || || |||||||||||||| Sbjct 858 TTGCATACCACCTCTAAGTCTGAGGACTAAGTGAAGAGTTGATTCTTTTTGGATGTTGTA 799 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| |||||| | | ||| || | || || || |||||||| || | || ||||| Sbjct 798 ATCAGCGAGTGTTCTATTGTCCTCTAATTGTTTTCCTGCAAAGATTAATCTTTGTTGATC 739 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGG 44282 || ||| | |||||| || || ||||| |||| | ||| | || || || | | Sbjct 738 TGGAGGAATACCTTCTTTGTCTTGGATCTTG-GCTTTGACGTTTTCAATAGTATCAGAAG 680 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | || || || ||||| || | || || |||||||||||||| Sbjct 679 GTTCAACATCAAGAGTGATGGTTTTTCCAGTCAAAGTTTTGACGAAGATTTGCAT 625 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168 |||| ||||| ||||| | || | |||||| || || |||||||||||||| || | Sbjct 1081 TTCCACCTCTAAGTCTGAGGACTAAGTGAAGAGTTGATTCTTTTTGGATGTTGTAGTCAG 1022 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 |||| | | ||| || | || || || || || || || | || ||||||| || Sbjct 1021 CGAGAGTTCTGTTGTCCTCTAATTGTTTTCCTGCGAAAATTAATCTTTGTTGATCTGGAG 962 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCC 44287 | | |||||| || || ||||| |||| | ||| | |||||||| | | ||| Sbjct 961 GAATACCTTCTTTGTCTTGGATCTTG-GCTTTGACGTTTTCAATGGTGTCAGAAGGTTCA 903 Query 44288 ACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | || || || ||||| || | || || |||||||||||||| Sbjct 902 ACATCAAGAGTGATGGTTTTTCCAGTCAAAGTTTTGACGAAGATTTGCAT 853 >seq33152 Length=3236 Score = 109 bits (120), Expect = 4e-19 Identities = 169/237 (71%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| ||||| | || | |||||| || ||||||||||||||||| Sbjct 2911 TTGCATACCACCTCTAAGTCTGAGGACTAAGTGAAGAGTTGATTCCTTTTGGATGTTGTA 2852 Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 |||||| ||||| | | ||| || | || || ||||| ||||| || | || ||| Sbjct 2851 ATCGGCAAGAGTT--CTGTTGTCCTCTAATTGTTTACCGGCGAAGATTAATCTTTGTTGA 2794 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTCGGC 44280 |||| || | |||||| || || || || |||| || | || | |||||||| | Sbjct 2793 TCTGGTGGGATACCTTCTTTGTCTTGGAT-TTTGGCTTTAACGTTTTCGATGGTGTCAGA 2735 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||| || || | || || || || || ||||| || || |||||||||||||| Sbjct 2734 AGGTTCAACATCTAAGGTGATAGTTTTACCGGTGAGAGTTTTGACGAAGATTTGCAT 2678 Score = 102 bits (112), Expect = 6e-17 Identities = 179/255 (70%), Gaps = 8/255 (3%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| ||||| | || | |||||| || ||||||||||||||||| Sbjct 2683 TTGCATACCACCTCTAAGTCTGAGGACTAAGTGAAGAGTTGATTCCTTTTGGATGTTGTA 2624 Query 44164 ATCGGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 |||||| | ||| | | ||| || | || || ||||| ||||| || | || ||| Sbjct 2623 ATCGGCTAAGGTT--CTGTTGTCCTCTAATTGTTTACCGGCGAAGATTAATCTTTGTTGA 2566 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGC 44280 |||| ||| | |||||| || || || || |||| | ||| | |||||||| | Sbjct 2565 TCTGGAGGAATACCTTCTTTGTCTTGGAT-TTTGGCTTTGACATTCTCGATGGTGTCAGA 2507 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCATG-- 44338 | ||| || || | || || || || || |||||||| || || || ||||||||| Sbjct 2506 AGGTTCAACATCTAAAGTGATAGTTTTACCAGTGAGGGTTTTGACAAATATTTGCATGTT 2447 Query 44339 ATGTGAATGAAAATA 44353 | | ||||||| || Sbjct 2446 TTTTAAATGAAATTA 2432 Score = 100 bits (110), Expect = 2e-16 Identities = 167/237 (70%), Gaps = 6/237 (3%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| ||||| | || | ||||| || ||||||||||||||||| Sbjct 3139 TTGCATACCACCTCTAAGTCTGAGGACTAAATGAAGAGTTGATTCCTTTTGGATGTTGTA 3080 Query 44164 ATCGGCGA--GTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 |||||| | ||| | | ||| || | || || ||||| ||||| || | ||| ||| Sbjct 3079 ATCGGCTAAGGTT--CTGTTGTCCTCTAATTGTTTACCGGCGAAGATTAATCTCTGTTGA 3022 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTC-CTATGGTGTCGGC 44280 |||| || | |||||| || || || || ||| | || ||| | ||||| || | Sbjct 3021 TCTGGTGGGATACCTTCTTTGTCTTGGATTTT-TGCCTTAACGTTTTCAATGGTATCAGA 2963 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||| || || | || || || || || || ||||| || |||||||||||||| Sbjct 2962 AGGTTCAACATCTAAGGTGATAGTTTTACCAGTAAGGGTTTTGACGAAGATTTGCAT 2906 >seq17428 Length=1321 Score = 100 bits (110), Expect = 2e-16 Identities = 168/239 (70%), Gaps = 3/239 (1%) Strand=Plus/Plus Query 44101 TTATTTCATTCCC-CCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGT 44159 |||||| ||| || ||||| ||||| | |||| |||||| || || |||||||||| Sbjct 245 TTATTTAATTTCCACCTCTAAGTCTTAGGACCAAGTGAAGAGTTGATTCTTTTTGGATGT 304 Query 44160 TGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCT 44219 |||| || ||||| | | ||| || | || || || || ||||| || | || | Sbjct 305 TGTAGTCAGCGAGAGTTCTGTTGTCTTCTAATTGTTTTCCTGCGAAGATTAATCTTTGTT 364 Query 44220 GATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTCG 44278 |||||| ||| | |||||| || || ||||| |||| | | || | |||||||| Sbjct 365 GATCTGGAGGAATACCTTCTTTGTCTTGGATCTT-GGCTTTGACGTTTTCAATGGTGTCA 423 Query 44279 GCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | | ||| || || | || || || ||||| || | || || |||||||||||||| Sbjct 424 GAAGGTTCAACGTCAAGAGTGATGGTTTTTCCAGTCAAAGTTTTGACGAAGATTTGCAT 482 Score = 100 bits (110), Expect = 2e-16 Identities = 167/237 (70%), Gaps = 6/237 (3%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| ||||| | || | |||||| || ||||||||||||||||| Sbjct 933 TTGCATACCACCTCTAAGTCTGAGGACTAAGTGAAGAGTTGATTCCTTTTGGATGTTGTA 992 Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 ||| || ||||| | | ||| || | || || || || ||||| || | || ||| Sbjct 993 ATCAGCAAGAGTT--CTGTTGTCCTCTAATTGTTTTCCTGCGAAGATTAATCTTTGTTGA 1050 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGC-TTCAATGTTCCTATGGTGTCGGC 44280 |||| ||| | |||||| || || ||||| ||| || | || | |||||||| | Sbjct 1051 TCTGGAGGAATACCTTCTTTGTCTTGGATCTT-TGCTTTGACATTTTCAATGGTGTCAGA 1109 Query 44281 GGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||| || || | || || || ||||| ||||| || || || || |||||||| Sbjct 1110 AGGTTCTACATCGAGAGTGATGGTTTTTCCTGTGAGTGTTTTAACAAATATTTGCAT 1166 Score = 82.4 bits (90), Expect = 5e-11 Identities = 161/236 (68%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| ||||| | || | ||||| || ||||||||||| ||||| Sbjct 705 TTGCATACCACCTCTGAGTCTGAGGACTAAATGAAGAGTTGATTCCTTTTGGATATTGTA 764 Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 |||||| ||||| | | ||| || || || || || || ||||| || | || ||| Sbjct 765 ATCGGCAAGAGTT--CTATTGTCCTCAAGTTGTTTTCCAGCGAAGATTAATCTTTGTTGA 822 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281 |||| ||| | |||||| || || || || || | || | || || || | Sbjct 823 TCTGGAGGAATACCTTCTTTGTCTTGAATTTTGGCTTTGACATTTTCAATAGTATCAGAA 882 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||| || || | || || || ||||| || | || || |||||||||||||| Sbjct 883 GGTTCAACATCAAGAGTGATGGTTTTTCCGGTCAAAGTTTTGACGAAGATTTGCAT 938 >seq22541 Length=1059 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 44109 TTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGG 44168 |||| ||||| ||||| | || | |||||| || |||||||||||||||||||| | Sbjct 215 TTCCACCTCTGAGTCTGAGGACTAAGTGAAGAGTTGATTCCTTTTGGATGTTGTAATCAG 274 Query 44169 CGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAG 44228 |||| | | ||| || | || || || || ||||| || | || ||||||| || Sbjct 275 CGAGAGTTCTGTTGTCTTCTAATTGTTTTCCTGCGAAGATTAATCTTTGTTGATCTGGAG 334 Query 44229 GCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCA 44288 | | |||||| || || ||||| || | || | || ||||| | | ||| | Sbjct 335 GAATACCTTCTTTGTCTTGGATCTTGGCTTTGACATTTTCGATAGTGTCAGAAGGTTCAA 394 Query 44289 CCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || | || || || ||||| || | || || || ||||||||||| Sbjct 395 CATCAAGGGTGATGGTTTTTCCGGTCAAAGTTTTGACAAAGATTTGCAT 443 Score = 87.8 bits (96), Expect = 1e-12 Identities = 162/236 (69%), Gaps = 4/236 (2%) Strand=Plus/Plus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||| ||||| | || | |||||| || || |||||||| ||||| Sbjct 438 TTGCATACCACCTCTAAGTCTGAGGACTAAGTGAAGAGTTGATTCTTTTTGGATATTGTA 497 Query 44164 ATCGGC--GAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGA 44221 |||||| ||||| | | || || || || || || || ||||| || | || ||| Sbjct 498 ATCGGCAAGAGTT--CTATTATCCTCAAGTTGTTTTCCTGCGAAGATTAATCTTTGTTGA 555 Query 44222 TCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCG 44281 |||| ||| | |||||| || || ||||| || | || | || ||||| | Sbjct 556 TCTGGAGGAATACCTTCTTTGTCTTGGATCTTGGCTTTGACATTTTCGATAGTGTCAGAA 615 Query 44282 GATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||| || || | || || || ||||| || | || || |||||||||||||| Sbjct 616 GGTTCAACATCGAGAGTGATGGTTTTTCCGGTCAAAGTTTTGACGAAGATTTGCAT 671 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359825719579095