Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_003315.1 Length=31508 Score E Sequences producing significant alignments: (Bits) Value seq50397 80.6 5e-11 >seq50397 Length=207 Score = 80.6 bits (88), Expect = 5e-11 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 358 TGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTGCTCTACCG 417 ||||| | |||| || |||||||| ||||| || ||||||||||| | ||||||||| Sbjct 100 TGGTGAGCCGTGTTGGGTTCGAACCAACGACCTACTGATTAAAAGTCAGTTGCTCTACCA 41 Query 418 ACTGAGCTAACGACCCA 434 |||||||||||| |||| Sbjct 40 ACTGAGCTAACGGCCCA 24 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100573469489280