Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_003324.1 Length=57416 Score E Sequences producing significant alignments: (Bits) Value seq15943 136 1e-27 >seq15943 Length=290 Score = 136 bits (150), Expect = 1e-27 Identities = 164/223 (74%), Gaps = 0/223 (0%) Strand=Plus/Plus Query 44067 ATCATGCCGAGCGCTGCGAGGTAGGTGTCGAGGATGGCCTCTTGCTCCATCCGCTCGTCG 44126 |||||||| ||||| ||||| ||| || |||||||||| |||| ||||| || Sbjct 58 ATCATGCCAAGCGCGCTCAGGTAAAGGTCAAGAATGGCCTCTTCCTCCTGGCGCTCCGCG 117 Query 44127 GTGTCCTGCTTGCGCAGCGAGATCACCTTCCGCAGGATCTTGGCATCGAAGCCGGTCCCC 44186 |||||| |||||| || || |||||||||| |||||||| ||||| ||| | | Sbjct 118 CTGTCCTTCTTGCGAAGGCTGACGACCTTCCGCATGATCTTGGTGTCGAAACCGTTGGAC 177 Query 44187 TTTGCCTCGCCGTACACATCCTTGATGTCGTCGGCGATGGTCTTCTTTTCTTCCTCCAAG 44246 || || || || || || ||||||||||| ||||||| | |||||||||||| || | Sbjct 178 TTGGCTTCACCATAGACTTCCTTGATGTCAGCGGCGATTGCCTTCTTTTCTTCTTCAAGC 237 Query 44247 CGTTCGATGCGGTGGATGAAGGCCTTGAGCTGATCGCGCGCAA 44289 || |||||||| | ||| | | | |||| || | |||||| Sbjct 238 CGCTCGATGCGTTCGATCAGGCTCCTGAGTTGGCCTTGCGCAA 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183371608908672