Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq59922 376 4e-99 seq75063 185 1e-41 seq3443 116 5e-21 seq14334 98.7 1e-15 >seq59922 Length=6033 Score = 376 bits (416), Expect = 4e-99 Identities = 1414/2182 (65%), Gaps = 82/2182 (4%) Strand=Plus/Minus Query 78709 TTGTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCC 78768 ||||| | ||| || | ||| | | | | ||| | |||||| || | || ||||||||| Sbjct 3512 TTGTCAACTGTAAACTTAATTGCATCCGTTGCTGCTTTCGTTCGCAAGTAATACATTCCC 3453 Query 78769 GTTTTTAGACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGAATAACTCGGA 78828 ||||| | || |||||||||||| |||||| ||| ||||| | | | | Sbjct 3452 GTTTTCAATCCTTTTTCCCATCCGTAGAAGTGCATAGACGTCAGTTTCCCGAAGTTTGCA 3393 Query 78829 TCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCC 78888 | | | || ||||||| |||||| |||| ||| | || || || || ||||| Sbjct 3392 TTTTCCATGAAAATATTCAATGATTGAGATTGACAAATGTAAGCCCCTCTATCCGCAGCT 3333 Query 78889 ATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATATCT 78948 | || |||| ||||| | ||| ||||| ||||| |||| |||| | Sbjct 3332 TGATCGATAATCGCTTTTTGCGAAATCTCCCATGCTGTTTTGTAAAGATCTTTAAGTCGT 3273 Query 78949 TCTGGAAGGTT---TGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATC 79005 | ||||| ||| | | || || || ||||| | ||| ||||||| || || Sbjct 3272 TGTGGAACGTTATCTATGTTTTGGATAGATCCGTTAGCTGTCATAATCATACGACGCATT 3213 Query 79006 TCTTCATTCCATAATT-TTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTG 79064 |||| ||||| ||| |||| | | | | || | | | ||| ||||| | || Sbjct 3212 TCTTTGTTCCACAATCCTTCTTTAACT-AGATCTTTCAATAAGTGCTTGTTAACGA--TG 3156 Query 79065 A--AATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGAT 79122 | || || || ||||| || | | || || || || ||||||||||| | || Sbjct 3155 ATGAACTCACCTGACAACACACGTCTTGTATAGATGTTTGAAGTATATGGTTCGAAACAT 3096 Query 79123 TCATTATTTCCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTA 79182 || || ||||| | |||||||| ||||| || |||||||| ||||||| || || Sbjct 3095 TCGTTGTTTCCAAGGATTTGAGCTGTTGAAGCTGTTGGCATTGGTGCCAATAACAATGAG 3036 Query 79183 TTTCTAAGACCGTATGATC--TGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAG 79240 || | | ||||| | || | | || |||| | ||||| ||||| | Sbjct 3035 TTACGCACACCGT--GCTCCATCACTTCTGCTTTCAATACGTCCCATTCCCATCTGCTTG 2978 Query 79241 ACGGGACAACATTCCAAAGATCATATTGTAGAAT--ACCGTT----ACTAGCGTATGATC 79294 || ||||||||| | ||| |||| |||| ||| || ||| ||| ||| Sbjct 2977 TTGGAGTAACATTCCACATATCGAATTG--GAATTGACCTTTTGAAACTGGCG----ATC 2924 Query 79295 CTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTC 79354 || || | || || ||||| || || ||||| || | || | || Sbjct 2923 CTTCATAAGATTGGTATGGTCCATCAACTTTAGCTAAATCTTTAGATGCAGTCATTGAAG 2864 Query 79355 CGTAATAAATGGTTTCGAAAATCTTCT-TATTGA--GATCTTG-TGCTTCTAGGCTATCA 79410 ||||||| || ||||| |||| ||||| | || | | ||||| | ||||| | | ||| Sbjct 2863 CGTAATACATTGTTTCAAAAA-CTTCTCTGTTCAATGCTCTTGCTTCTTCT--GAT-TCA 2808 Query 79411 AATGGATAAT----TTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGAT 79466 ||||| ||| |||||| | || || |||||||| ||||||||||| | || || Sbjct 2807 AATGGC-AATCCCATTAAGA---TGAAAGCATCTGCTAACCCTTGAACACCTAATCCAAT 2752 Query 79467 AGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTAT 79526 || | || | | | ||||| ||| ||||||| || || || | ||| ||| || Sbjct 2751 TGGACGGTGACGCATGTTAGAGTTTTTAGCTTCTTCAACTGGGTAGAAGTTACCATCAAT 2692 Query 79527 AATTTTATTGAGATTCCTGACTATTACTTTGACC---ACATCCTTTAGTTTGAGAAAATC 79583 |||||||| | ||| | | | ||| | | || || | |||| ||| Sbjct 2691 GATTTTATTCAAGTTC---AATGTCGCTTGGTACGTTACCTCGAACAATTTGTCGTGATC 2635 Query 79584 AAATCGTCCATCTATTACAAACATGTT----CAACGCGACAGATGCCAGATTACAAACGG 79639 ||| || || || | ||||| || ||| || | ||| |||| |||||||| | Sbjct 2634 GAATTTCCCTTC-ATCAGTAACATATTTAGGCAATGCTAAAGAAGCCAAGTTACAAACTG 2576 Query 79640 CTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGG 79699 | ||||||| | | | || | ||| || ||||| || | ||| | ||||||| | Sbjct 2575 CAACCTCATCTGGCGCAGTGTACTCTATAATCTCAGTACATAAGTTTGAAGACTTAATTG 2516 Query 79700 TTCCTAAATTTTGTTGATTACTCTTTTTG---TTACACGCATCCTTATAAAGAATGAACG 79756 | ||||| |||||||| || | ||||| || || ||||| || || | ||| | | Sbjct 2515 TACCTAAGTTTTGTTGGTT--TGATTTTGAGTTTGCA-GCATCTTTGTACAACATGTAAG 2459 Query 79757 GAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTT---CCAGACGACTCGAGCCTTTA 79813 ||||||| || ||||| |||||||||| || ||| ||| | | || | || || | Sbjct 2458 GAGTACCTGTCTCAATTTGAGATTCTAAGAT---TTTGAACCAAAGGTCTTGTGCTTTGA 2402 Query 79814 TTATAGACTTGTATCTCTTTTC----TCTTTCGTATTGTGTATATAATCGTTCGAACTCG 79869 || | || | | |||| | | ||||||| | || || || |||||| || Sbjct 2401 TTGT----TTTTCTTCCTTTCCCTGCTTTTTCGTACTTCGTGTACAACGCTTCGAATTCA 2346 Query 79870 TCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACTCTCCA 79929 | | ||||| | || || ||||||| |||||||| || | |||||||||| Sbjct 2345 GCACTGTGCACATCTGAAAGACCTGGGCATTCGTGCGGACACATTAAAGTCCACTCTCCA 2286 Query 79930 TCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 79989 | || || || |||| ||| || | ||| |||| ||| | ||| ||||| |||||| Sbjct 2285 TTTTCTTTCACACGTTGCATGAATAAATCTGGAACCCACAAAGCGTAAAATAAATCTCTT 2226 Query 79990 GTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAA 80049 | ||| ||||| || || || ||| || || | || | ||| | | | ||||| | Sbjct 2225 GCTCTTTGCTCTTCTTTACCGTGATTTTTCTTCAAGTCTAAGAAGTCAAATACATCAGCA 2166 Query 80050 TGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATG 80109 ||||| || |||||||| || || | | || ||||| ||| || ||||||| | Sbjct 2165 TGCCAAGGCTCCAAGTACATTGCGAAAGAACCTTTACGTTTTCCTCCACCTTGATCTACG 2106 Query 80110 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTG 80169 |||||||| || | ||| | ||||| |||||||||| ||||| || || | ||| || Sbjct 2105 TATCTAGCAGTATCGTTAAATACTCTTAACATTGGAACGATACCGTTAGAAGCACCGTTT 2046 Query 80170 GTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCT 80229 || || ||| || || | ||||| || || || | | || ||||| || Sbjct 2045 GTTCCTTTGATGTATGAACCTGTCGCACGGATGTTGTGCATAGCCAATCCAATTCCACCA 1986 Query 80230 GCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCA 80289 || || |||||| || ||| ||||||| || ||||| || || || || ||||| Sbjct 1985 GCTGATTGAGAGATCTGAGCACATTGTTTTAATGTGTCATAAATTCCTTCAATACTATCT 1926 Query 80290 TCAATCA-TGTTAAGTAGAAAACAGCTAGACATT--TGGTGACGACTAGTTCCCGCATTA 80346 || ||| |||||| || ||||| |||||| |||| | | ||||| | ||| Sbjct 1925 TCCTTCATTGTTAA-AAGGAAACAAGATGACATTTGTGGTTTTGGC--GTTCCAGAGTTA 1869 Query 80347 AATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATA 80406 || || || || | ||||| || |||||| ||| |||| || ||||| |||| ||| Sbjct 1868 AACAACGTTGGTGTTGCGTGTGTGAACCATCCTTCTGACATTAAGTTGTATGTCTTAATT 1809 Query 80407 GCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGTGCTGAGGT 80466 || || || ||||| || |||||||| || | |||||||| ||||| || || || Sbjct 1808 GCAGAGTCGATATCTTTTTTGTGAATTCCAACAGAAACACGCATCAACATTTGTTGTGGG 1749 Query 80467 CTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCA 80526 | ||| | ||| | || | ||||| | ||| || ||| |||||||||||| Sbjct 1748 CGTTCTGCAATCATTCCGTTCAATTTCATTAGGTACGAGCGCGTCAACGTTTTAAAACCA 1689 Query 80527 AAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATAT 80586 ||||||| |||| ||| |||| |||||||| || || | || || |||| | Sbjct 1688 AAATAGTCGTATCTAAAATCTCTATCGTAAATGATGCTTGAATCAAGACGGTCTTTATTT 1629 Query 80587 TTGTTAACTACATC--CATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAG 80644 | | | | || | || | || || |||| | | || || ||| |||| | Sbjct 1628 TCCATCATGATCTCGTAAACGTCGT-CTGCAACTAAT-GATGCATTTTCTCCAGTTTTTG 1571 Query 80645 GATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGT 80704 ||| || || | | | ||| ||| |||||| || | || |||||||| |||| Sbjct 1570 GATCAATGTAATCGTGCATATCTGTCATTACTTCAGAGAAAACCTTCTTTGTTTCTTTGT 1511 Query 80705 GTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATAATCTGGATGTTGTGTAGTAC 80764 | | |||||||| || || | | || || | |||||||| ||||| | | || Sbjct 1510 GCAAGTTTGATACAGCAATACGTGAAGCCAACAACGCATAATCAGGATGATCAATTGTTT 1451 Query 80765 AAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATA 80824 | ||||| | ||| ||||| || |||| |||| | ||||| ||||||| | | | Sbjct 1450 TTGCCGCTGCCACTTCAGCTGCAAGGTTGTCTAATTGTGTTGTTGTAACTCCATCAAACA 1391 Query 80825 TTCCTTGGATAACCTTCATAGC 80846 |||| || |||||||| || Sbjct 1390 ACCCTTCAATTACCTTCATGGC 1369 Score = 327 bits (362), Expect = 2e-84 Identities = 623/902 (69%), Gaps = 19/902 (2%) Strand=Plus/Minus Query 49656 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 49715 || |||||| ||||||||||||||| || | ||||| || || || ||||| |||| Sbjct 1160 CAAAACTCCAGCTTTTTGGTATTCACCAACTCTCTTTTCAAAGAAGTTCGTTTTCCCTTG 1101 Query 49716 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 49775 | ||| || |||||||||||||||| || || || | || | | ||||| ||| Sbjct 1100 AATTGAAATCATTTCCATGAAATCAAATGGGTTTGTCGCGTTGAATACTTTTTCGTTTCC 1041 Query 49776 CAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATT 49835 ||||| | | |||||||| || ||||| || || ||| ||||| |||| || Sbjct 1040 TAATTCCAACAATAATCTATCAGCAACAAACTCAATGTATTGCGACATCAAATCACTGTT 981 Query 49836 CATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGC 49895 |||||| || | ||||| ||||| || || || |||||||| ||||| || || Sbjct 980 CATTCCGATTAACTTAACGGGAAGTGCTTCAAGAATAAATTCTTTCTCAATTTCAACTGC 921 Query 49896 ATCTGTTATAATAGATCT-AACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAA--- 49951 || ||||| ||| ||| ||||| | || || | | || || Sbjct 920 GTCAAGGATAATTT-TCTGAACTGTTTCCTTTGGAAGTTTATCAACGATGTGGTTGGTGT 862 Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011 | | |||||||||||||| ||||||| || |||||||| |||| ||||| || | Sbjct 861 ATAATAAACATGCGAAATCACAGTGCAATCCTTCGTCTCTTGAGATTAACTCGTTAGAGA 802 Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCA--AAATATGGACGCAAATGACCC 50069 | | || || ||||| || || | || || | ||| |||| || || ||| || || Sbjct 801 AAGAAAGCCCTGGCATCAGTCCTCTTTTCTTCAACCAGTAAAT-TGAACAGAAA-GAACC 744 Query 50070 AGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCT 50129 || ||||| |||||||| ||||| ||||| ||||||||||| ||| || | || || Sbjct 743 TGAGAAGAAAATTCCTTCCACTGCTGCAAATGCAACAAGTCTTTCTGCAAA--TGATCCT 686 Query 50130 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 50189 |||| ||||| ||||||||| || || || ||||| ||| || || || Sbjct 685 -TCATCAATCCAACGCAAAGCCCAATCTGCTTTTACCTTAACACATTCCATTGTGTCAAT 627 Query 50190 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACT 50249 |||||||| | ||| | ||| || || | ||||||| |||||||| || ||||| Sbjct 626 AGCATTAAACAAATATTCTTTGTCCTTCGTGTCTTTAATGTAAGTATCTATTAAAAGCGA 567 Query 50250 ATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTC 50309 |||| |||| || ||||||||||||| || | || || ||||||||| || | ||||| Sbjct 566 ATACGTTTCAGAGTGAATGTTTTCAACTGCTACTTGGAACCCGTAGAAAAATTTTGCCTC 507 Query 50310 GGTAATCTGCACTTCTGTACAAAATCGT-TCAGCTAAATTTTCATTCACTATTCCGTCAC 50368 ||| ||| ||||||| |||| | | || ||||| |||||||| || ||||| || Sbjct 506 AGTATACTGAACTTCTG-ACAAGAAATTCTCTGCTAAGTTTTCATTTACAATTCCATCTG 448 Query 50369 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTT--- 50425 || || ||||| |||||||||||||| | |||||| ||| || | || | Sbjct 447 ATGCCGCGAAAAAAGCCAATACATGTTTAACAAAATGACGTTCATTATCGTTCAGCTTCG 388 Query 50426 TATTCCAATCATTGATATC-TTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCC 50484 ||| ||||||| | | || | || | ||| | ||||| ||||||| || || Sbjct 387 TATCCCAATCAATTAAGTCGGCTTGA-AGATCAATCTCTTCGGCTGTCCAGAAACTAGCT 329 Query 50485 TCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTA 50544 || |||||||| || | | ||| ||||||| | ||| ||||| || | ||||||||| Sbjct 328 TCGGCCTTTTTGTAGAAAGCCCAAATGTCATCGTGTTGAATTGGAAATAGAACAAATCTG 269 Query 50545 TT 50546 || Sbjct 268 TT 267 >seq75063 Length=1318 Score = 185 bits (204), Expect = 1e-41 Identities = 594/911 (65%), Gaps = 27/911 (3%) Strand=Plus/Plus Query 49648 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 49707 |||| |||||||| || |||||| || |||| || | ||||||| ||||||||| Sbjct 93 TCTTTTGACATAACCCCTGCTTTTTGATACTCACTTACTTTTCTTTCGAAGAAATTAGTT 152 Query 49708 TTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttt 49767 ||||||| | ||| || | ||||| | || || ||||| |||| || | || Sbjct 153 TTTCCTTGAAGTGAAATCATGTCCATCCATTCGAATGGATTAACTGCATTG-AAGTGCTT 211 Query 49768 ttAAATCCCAA---TTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATC 49824 | | |||| | ||| | | |||||| || ||||| || |||||| | ||| Sbjct 212 TGGTACTCCAAGAGTAAAGAGA--AGTCTATCAGCAACAAACTCAATATATTGTCCCATA 269 Query 49825 ATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCA 49884 | || | |||||| || ||||||| || || | || ||| | |||||| | ||| Sbjct 270 AGTTTGCTATTCATACCAATAAGTTCTACGGGCAAAGATTCAGATACAAATTCAAGCTCA 329 Query 49885 ATGGATACCGCATCTGTTATAATAGATC-TAACGGTTTCTTCACTCGGTGGATGC---AA 49940 || | ||| || || || | ||| || ||| ||||| || | ||| | | Sbjct 330 ATTGCTACTGCTTCAGTCAAAATT--TCATAAA---TTCTT---TCATTTGATACCTTAT 381 Query 49941 TAA----ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAA 49996 ||| ||||||| ||| |||||| || || || || | ||||| ||||| | Sbjct 382 TAACCATATGTTTATACAACAAACAAGCAAAGTCAGTATGTAATCCCTCATCTCTTGAGA 441 Query 49997 TTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGG 50056 | | || || || || || || ||||| || | |||||| | ||| || || | Sbjct 442 TCAACTCATTAGAGAAACAAAGGCCTGGCATAAGAGATCTCTTTTTCAACCAGAAAATTG 501 Query 50057 ACGCAAAT-GACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCT 50115 |||||| |||||||| ||||| ||||||||||| ||||| |||| | ||| || Sbjct 502 -CGCAAAAAGACCCAGAGAAGAAAATTCCTTCTACACAAGCAAACGCAATCAATCTTTCA 560 Query 50116 CCATAACTGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAA 50175 || | | | | | || ||||| || |||||| || |||||||| || ||| Sbjct 561 GCAAATGAGTCATTCTTATTAATCCATTTAAAAGCCCAGTCAGCCTTCTTCTTAACAGTT 620 Query 50176 GGCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTA 50235 || | || || || ||||| || | | |||||| || ||| ||| ||||||| Sbjct 621 TCAATATTATCAATAGCCTTAAAAAGGAAATCTTTTTCTTTGAGATCACTAATATAAGTA 680 Query 50236 TCGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAG 50295 || || | ||| || |||| |||| || || || | || || || ||| Sbjct 681 TCAATAAGGAGAGAGTAAGTTTCACTGTGAACATTCTCCATCATACTTTGGAAGCCATAG 740 Query 50296 AAACATCTAGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTC 50355 || |||||| | || | || || ||||| | | || | |||| | ||| ||| Sbjct 741 AAGCATCTAACTTCAGGGATTTGTACTTCAGCAGCGAAGCATTCAATAAGATTCTCAAGG 800 Query 50356 ACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTG 50415 || ||||| ||| || || || || || | || | ||| || || ||| | || | Sbjct 801 ACAATTCCATCAGAAGCAGCGAAGAAAGCAAGCACGTATTTGATGAAGTGTCTCTCATCA 860 Query 50416 GGTGTTAGTTTAT---TCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTC 50472 ||| ||||| ||||||| || | |||| || | ||||| ||||| || | Sbjct 861 TCATTTAATTTATCATTCCAATCTTTTAAATCTGAAGCCAAATCTATCTCTTCAGCTACC 920 Query 50473 CAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAA 50532 ||||| |||| | | |||||| ||||| | ||| | ||| || ||||||||||||||| Sbjct 921 CAAAAGCATGCTTGTTGCTTTTTGTACATTTCCCAAACGTCGTGGTATTGGATTGGGAAA 980 Query 50533 ATAACAAATCT 50543 | ||| ||||| Sbjct 981 AGAACGAATCT 991 >seq3443 Length=346 Score = 116 bits (128), Expect = 5e-21 Identities = 201/292 (69%), Gaps = 0/292 (0%) Strand=Plus/Minus Query 80095 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 80154 || |||||||||| ||| | || || | ||| |||| || ||| || | ||||||| Sbjct 315 CCGCCCTGATCTACGTAACGCGCAGTATCGTTAAAAACCTGCAGCATGGGCACAATACCA 256 Query 80155 TTGGATGTACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 80214 ||||| || |||||||| || | |||||| || |||| || | ||| || || Sbjct 255 TTGGAAGTCCCATTGGTACCTGCGATATAAGAACCTGTGGCCCGTACATTGTGTATGGAA 196 Query 80215 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 80274 |||||||| || || || || || ||| ||| | |||||| ||||||||| || Sbjct 195 AGACCTATCCCGCCAGCAGATTGTGAAATTTTTGCCGTTTGTTTTAGCGTATCATAAATA 136 Query 80275 CCCTCTATGCTATCATCAATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 80334 || || || ||||| || |||| | || ||||| |||||||| | | Sbjct 135 CCATCAATACTATCGTCCTTCATTGCCAAAAGGAAACAAGAGGACATTTGAGGTTTAGGG 76 Query 80335 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACA 80386 || |||| |||||| |||||||| | |||||| ||||| | |||| |||| Sbjct 75 GTACCCGAATTAAACAAGGTAGGTGTAGCGTGGGTAAAATACTTTTTGGACA 24 >seq14334 Length=297 Score = 98.7 bits (108), Expect = 1e-15 Identities = 181/262 (69%), Gaps = 5/262 (2%) Strand=Plus/Plus Query 50285 GAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGT-ACAAAATCGTTCAGCT 50343 |||| |||||||| | | ||||||| | || ||||| | || |||| ||||||| Sbjct 1 GAAAACCGTAGAAGAACTTTGCCTCGGCATATTGAACTTCACTTACGAAATT-TTCAGCT 59 Query 50344 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 50403 | |||||||||||| || || ||| || ||||| ||||| | | ||||||||| ||| Sbjct 60 AGATTTTCATTCACAATACCATCAGATGCAGCAAAGAACGCTAGAATATGTTTTATGAAA 119 Query 50404 TGTTTTTCGTTGGGTGTTAGTTTAT---TCCAATCATTGATATCTTTAGATATATCTACT 50460 | ||| | | | | || | |||||||||| | ||| | | |||| | Sbjct 120 TAACGTTCATCGCTATTCAACTTGTTGGTCCAATCATTAAGATCCGTGTGCAGGTCTATT 179 Query 50461 TCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATAT 50520 ||||| | |||||||| ||||| ||||| ||| || ||| | ||||| | | Sbjct 180 TCTTCAGCAGTCCAAAAACTAGCCTCACATTTTTTGTACCAATCCCACAAATCATGGTGT 239 Query 50521 TGGATTGGGAAAATAACAAATC 50542 | ||| |||||||||||||||| Sbjct 240 TTGATAGGGAAAATAACAAATC 261 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 717288794049280