Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_006938.1 Length=63649 Score E Sequences producing significant alignments: (Bits) Value seq1104 86.0 3e-12 >seq1104 Length=359 Score = 86.0 bits (94), Expect = 3e-12 Identities = 120/166 (72%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 9410 GATCATGCGGTCCACGTGGGACTGGGCCGAGCCCGGCACCCTGTTCATCGACCAGATCAA 9469 |||||||| | | || | | || ||||| |||||| | || || |||| ||||| Sbjct 74 GATCATGCAGGCAACCTTTGCCTATGCCGAACCCGGCGTAATTTTTATTGACCGCATCAA 133 Query 9470 CCGCATG-AACAATCTCAAGTACTGCGAGACCATCGCCGCCACCAATCCCTGCGGCGAGC 9528 || | ||||| || |||||||| ||||| |||||||||||| ||||| || | Sbjct 134 T-GCGCGCAACAACCTGTCTTACTGCGAAACCATTCACGCCACCAATCCGTGCGGTGAAC 192 Query 9529 AGCCCCTCCCACCGTACGGTGCCTGCCTCTTGGGCTCCTTCAACCT 9574 |||| || || || |||||||||||||| | || ||| |||| || Sbjct 193 AGCCGCTGCCGCCCTACGGTGCCTGCCTGCTCGGTTCCATCAATCT 238 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203281216809920