Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq59922 345 5e-90 seq75063 172 7e-38 seq3443 105 8e-18 seq14334 89.7 6e-13 seq17866 86.0 8e-12 >seq59922 Length=6033 Score = 345 bits (382), Expect = 5e-90 Identities = 950/1438 (66%), Gaps = 37/1438 (3%) Strand=Plus/Minus Query 62706 ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 62765 || || || || ||||| ||||||||||| | || || || | || | | | |||||| Sbjct 2789 ATGAAAGCATCTGCTAACCCTTGAACACCTAATCCAATTGGACGGTGACGCATGTTAGAG 2730 Query 62766 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC--TGA 62823 ||| ||||||| || || || | ||| ||| || |||||||| | | ||| || Sbjct 2729 TTTTTAGCTTCTTCAACTGGGTAGAAGTTACCATCAATGATTTTATTCA-AGTTCAATGT 2671 Query 62824 CAATT---ACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATTACAA 62880 | || || || || || || |||| ||| ||| ||| || || | | Sbjct 2670 CGCTTGGTACGTT----ACCTCGAACAATTTGTCGTGATCGAATTTCCCTTC-ATCAGTA 2616 Query 62881 ACATGTT----CAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 62936 |||| || ||| || | ||| |||| |||||||| || ||||||| | | | Sbjct 2615 ACATATTTAGGCAATGCTAAAGAAGCCAAGTTACAAACTGCAACCTCATCTGGCGCAGTG 2556 Query 62937 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTA 62996 || | ||| |||||||| || | || | |||| || || ||||| |||||||| || Sbjct 2555 TACTCTATAATCTCAGTACATAAGTTTGAAGACTTAATTGTACCTAAGTTTTGTTGGTT- 2497 Query 62997 CTCTTTTTG---TTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 63053 | ||||| || || ||||| || || | ||| | |||||||| || ||||| ||| Sbjct 2496 -TGATTTTGAGTTTGCA-GCATCTTTGTACAACATGTAAGGAGTACCTGTCTCAATTTGA 2439 Query 63054 GATTCTATAATCGCTTT---CCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCCTT 63110 ||||||| || ||| ||| | | || | || || ||| | | | | ||| | Sbjct 2438 GATTCTAAGAT---TTTGAACCAAAGGTCTTGTGCTTTGATTGTTTTTCTTCCTTTCCCT 2382 Query 63111 TCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAATCCA 63170 || ||||||| || ||||| |||||| || | | |||| | || Sbjct 2381 GCTTTTTCGTACTTCGTGTACAACGCTTCGAATTCAGCACTGTGCACATCTGAAAGACCT 2322 Query 63171 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 63230 || ||||| | ||||||||| || | ||||||||| | || ||||| |||| ||| || Sbjct 2321 GGGCATTCGTGCGGACACATTAAAGTCCACTCTCCATTTTCTTTCACACGTTGCATGAAT 2262 Query 63231 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 63290 | ||| |||| ||| | ||| ||||| |||||| | ||| || || || || || | Sbjct 2261 AAATCTGGAACCCACAAAGCGTAAAATAAATCTCTTGCTCTTTGCTCTTCTTTACCGTGA 2202 Query 63291 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 63350 || || || | || | ||| | | | ||||| |||||| || |||||||| || || Sbjct 2201 TTTTTCTTCAAGTCTAAGAAGTCAAATACATCAGCATGCCAAGGCTCCAAGTACATTGCG 2142 Query 63351 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 63410 | | || ||||| ||| || ||||||| ||||||||| || | ||| | ||| Sbjct 2141 AAAGAACCTTTACGTTTTCCTCCACCTTGATCTACGTATCTAGCAGTATCGTTAAATACT 2082 Query 63411 CTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGATATAGCTTCCACTG 63470 || |||||||||| |||||||| || ||| || || || ||| || || | Sbjct 2081 CTTAACATTGGAACGATACCGTTAGAAGCACCGTTTGTTCCTTTGATGTATGAACCTGTC 2022 Query 63471 GCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 63530 ||||| || || || | | || ||||| || || || |||||| || ||| Sbjct 2021 GCACGGATGTTGTGCATAGCCAATCCAATTCCACCAGCTGATTGAGAGATCTGAGCACAT 1962 Query 63531 CGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCAT-GTTAAGTAGAAAACA 63589 ||||||| |||||||| || || || || ||||| || |||| ||||| |||| | Sbjct 1961 TGTTTTAATGTGTCATAAATTCCTTCAATACTATCTTCCTTCATTGTTAAAAGGAAACAA 1902 Query 63590 GCTAGACATTTG--GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTA 63647 | | |||||||| || | | ||||| | ||||| || || || | ||||| || Sbjct 1901 GAT-GACATTTGTGGTTTTGGC--GTTCCAGAGTTAAACAACGTTGGTGTTGCGTGTGTG 1845 Query 63648 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGA 63707 |||||| ||| || | || ||||| |||| ||| || ||||| ||||| || ||| Sbjct 1844 AACCATCCTTCTGACATTAAGTTGTATGTCTTAATTGCAGAGTCGATATCTTTTTTGTGA 1785 Query 63708 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATT 63767 ||||| || | |||||||| ||||| || || || | ||| | ||| | ||| | | Sbjct 1784 ATTCCAACAGAAACACGCATCAACATTTGTTGTGGGCGTTCTGCAATCATTCCGTTCAAT 1725 Query 63768 TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 63827 |||| | ||| || ||| ||||||||||||||||||| |||| ||| |||| Sbjct 1724 TTCATTAGGTACGAGCGCGTCAACGTTTTAAAACCAAAATAGTCGTATCTAAAATCTCTA 1665 Query 63828 TCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTATATC--CATGGTGA 63885 |||||||| || || | || || |||| || | | || || | || Sbjct 1664 TCGTAAATGATGCTTGAATCAAGACGGTCTTTATTTTCCATCATGATCTCGTAAACGTCG 1605 Query 63886 TACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATTAACATAGTTGAATAAATCCT 63945 | || || |||| | | || || ||| |||| |||| || || | | | ||| Sbjct 1604 T-CTGCAACTAAT-GATGCATTTTCTCCAGTTTTTGGATCAATGTAATCGTGCATATCTG 1547 Query 63946 CCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGG 64005 ||| |||||| || | || |||||||| ||||| | |||||||| || || | | Sbjct 1546 TCATTACTTCAGAGAAAACCTTCTTTGTTTCTTTGTGCAAGTTTGATACAGCAATACGTG 1487 Query 64006 CGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCA 64065 || | | |||||||| ||||| | | || | ||||| | ||| ||||| | Sbjct 1486 AAGCCAACAACGCATAATCAGGATGATCAATTGTTTTTGCCGCTGCCACTTCAGCTGCAA 1427 Query 64066 GAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAACCTTCATAGC 64123 | |||| |||| | ||||| ||||||| | | | |||| ||| |||||||| || Sbjct 1426 GGTTGTCTAATTGTGTTGTTGTAACTCCATCAAACAACCCTTCAATTACCTTCATGGC 1369 Score = 306 bits (338), Expect = 5e-78 Identities = 616/901 (68%), Gaps = 17/901 (2%) Strand=Plus/Minus Query 33000 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTC 33059 || |||||| ||||||||||||||| || | ||||| || || || ||||| |||| Sbjct 1160 CAAAACTCCAGCTTTTTGGTATTCACCAACTCTCTTTTCAAAGAAGTTCGTTTTCCCTTG 1101 Query 33060 CAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCC 33119 | ||| || |||||||||||||||| || || || | || | | ||||| ||| Sbjct 1100 AATTGAAATCATTTCCATGAAATCAAATGGGTTTGTCGCGTTGAATACTTTTTCGTTTCC 1041 Query 33120 CAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAATT 33179 ||||| | | |||||||| || || || || || ||| ||||| |||| || Sbjct 1040 TAATTCCAACAATAATCTATCAGCAACAAACTCAATGTATTGCGACATCAAATCACTGTT 981 Query 33180 CATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGC 33239 |||||| || | ||||| ||||| || || || |||||||| ||||| || || Sbjct 980 CATTCCGATTAACTTAACGGGAAGTGCTTCAAGAATAAATTCTTTCTCAATTTCAACTGC 921 Query 33240 ATCTGTTATAATAGATCT-AACGGTTTCTTCACTCGGTGGATGCAATAAATGTTTAA--- 33295 || ||||| ||| ||| ||||| | || || | | || || Sbjct 920 GTCAAGGATAATTT-TCTGAACTGTTTCCTTTGGAAGTTTATCAACGATGTGGTTGGTGT 862 Query 33296 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 33355 | | |||||||||||||| ||||||| || |||||||| |||| ||||| || | Sbjct 861 ATAATAAACATGCGAAATCACAGTGCAATCCTTCGTCTCTTGAGATTAACTCGTTAGAGA 802 Query 33356 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAG 33415 | | || || ||||| || || | || || | ||| | || ||| ||| || || | Sbjct 801 AAGAAAGCCCTGGCATCAGTCCTCTTTTCTTCAACCAGTAAATTGAACAGAAAGAACCTG 742 Query 33416 AAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGT 33475 | ||||| |||||||| ||||| ||||| |||| |||||| ||| || | | | | Sbjct 741 AGAAGAAAATTCCTTCCACTGCTGCAAATGCAACAAGTCTTTCTGCAAAT---GATCCTT 685 Query 33476 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 33535 ||| ||||| ||||||||| || || || ||||| ||| || || || | Sbjct 684 CATCAATCCAACGCAAAGCCCAATCTGCTTTTACCTTAACACATTCCATTGTGTCAATAG 625 Query 33536 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTAT 33595 ||||||| | ||| | ||| || || | ||||||| |||||||| || ||||| || Sbjct 624 CATTAAACAAATATTCTTTGTCCTTCGTGTCTTTAATGTAAGTATCTATTAAAAGCGAAT 565 Query 33596 ACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGG 33655 || |||| || ||||||||||||| || | || || ||||||||| || | ||||| | Sbjct 564 ACGTTTCAGAGTGAATGTTTTCAACTGCTACTTGGAACCCGTAGAAAAATTTTGCCTCAG 505 Query 33656 TAATCTGTACTTCTGTACAAAATCGT-TCCGCCAAATTTTCATTCACTATTCCGTCACTG 33714 || ||| ||||||| |||| | | || || || |||||||| || ||||| || Sbjct 504 TATACTGAACTTCTG-ACAAGAAATTCTCTGCTAAGTTTTCATTTACAATTCCATCTGAT 446 Query 33715 GCTGCAAAAAACGCCAATACATGTTTTATAAAAT-ATTTTTCGTCTGGTGTTAGTT---T 33770 || || ||||| |||||||||||||| | ||||| | || | | || | || | | Sbjct 445 GCCGCGAAAAAAGCCAATACATGTTTAACAAAATGACGTTCATTATCGT-TCAGCTTCGT 387 Query 33771 ATTCCAATCATTGATATC-TTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCT 33829 || ||||||| | | || | || | ||| | ||||| ||||||| || || | Sbjct 386 ATCCCAATCAATTAAGTCGGCTTGA-AGATCAATCTCTTCGGCTGTCCAGAAACTAGCTT 328 Query 33830 CTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCTAT 33889 | |||||||| || | ||| ||||||| | ||| ||||| || | ||||||||| | Sbjct 327 CGGCCTTTTTGTAGAAAGCCCAAATGTCATCGTGTTGAATTGGAAATAGAACAAATCTGT 268 Query 33890 T 33890 | Sbjct 267 T 267 >seq75063 Length=1318 Score = 172 bits (190), Expect = 7e-38 Identities = 589/910 (65%), Gaps = 25/910 (3%) Strand=Plus/Plus Query 32992 TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTT 33051 |||| |||||||| || |||||| || |||| || | ||||||| ||||||||| Sbjct 93 TCTTTTGACATAACCCCTGCTTTTTGATACTCACTTACTTTTCTTTCGAAGAAATTAGTT 152 Query 33052 TTTCCTTCCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAttttt 33111 ||||||| | ||| || | ||||| | || || ||||| |||| || | || Sbjct 153 TTTCCTTGAAGTGAAATCATGTCCATCCATTCGAATGGATTAACTGCATTG-AAGTGCTT 211 Query 33112 ttAAATCCCAA---TTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATC 33168 | | |||| | ||| | | |||||| || || || || |||||| | ||| Sbjct 212 TGGTACTCCAAGAGTAAAGAGA--AGTCTATCAGCAACAAACTCAATATATTGTCCCATA 269 Query 33169 ATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCA 33228 | || | |||||| || ||||||| || || | || ||| | |||||| | ||| Sbjct 270 AGTTTGCTATTCATACCAATAAGTTCTACGGGCAAAGATTCAGATACAAATTCAAGCTCA 329 Query 33229 ATGGATACCGCATCTGTTATAATAGATC-TAACGGTTTCTTCACTCGGTGGATGC---AA 33284 || | ||| || || || | ||| || ||| ||||| || | ||| | | Sbjct 330 ATTGCTACTGCTTCAGTCAAAATT--TCATAAA---TTCTT---TCATTTGATACCTTAT 381 Query 33285 TAA----ATGTTTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAA 33340 ||| ||||||| ||| |||||| || || || || | ||||| ||||| | Sbjct 382 TAACCATATGTTTATACAACAAACAAGCAAAGTCAGTATGTAATCCCTCATCTCTTGAGA 441 Query 33341 TTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGG 33400 | | || || || || || || ||||| || | |||||| | ||| || || | Sbjct 442 TCAACTCATTAGAGAAACAAAGGCCTGGCATAAGAGATCTCTTTTTCAACCAGAAAATTG 501 Query 33401 AAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTC 33460 || || ||||| ||||| ||||||||||| |||||| ||||| | ||| || Sbjct 502 CGCAAAAAGACCCAGAGAAGAAAATTCCTTCTACACAAGCAAACGCAATCAATCTTTCAG 561 Query 33461 CATAACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAG 33520 || | | | | | || ||||| || |||||| || |||||||| || ||| Sbjct 562 CAAATGAGTCATTCTTATTAATCCATTTAAAAGCCCAGTCAGCCTTCTTCTTAACAGTTT 621 Query 33521 GCATCGTTTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTAT 33580 || | || || || ||||| || | | |||||| || ||| ||| |||||||| Sbjct 622 CAATATTATCAATAGCCTTAAAAAGGAAATCTTTTTCTTTGAGATCACTAATATAAGTAT 681 Query 33581 CGATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGA 33640 | || | ||| || |||| |||| || || || | || || || |||| Sbjct 682 CAATAAGGAGAGAGTAAGTTTCACTGTGAACATTCTCCATCATACTTTGGAAGCCATAGA 741 Query 33641 AACATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCA 33700 | |||||| | || | || |||||||| | | || | ||| | ||| ||| | Sbjct 742 AGCATCTAACTTCAGGGATTTGTACTTCAGCAGCGAAGCATTCAATAAGATTCTCAAGGA 801 Query 33701 CTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTG 33760 | ||||| ||| || || || || || | || | ||| || || | | | || || Sbjct 802 CAATTCCATCAGAAGCAGCGAAGAAAGCAAGCACGTATTTGATGAAGTGTCTCTCATCAT 861 Query 33761 GTGTTAGTTT---ATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCC 33817 ||| ||| ||||||||| || | |||| || | ||||| ||||| || || Sbjct 862 CATTTAATTTATCATTCCAATCTTTTAAATCTGAAGCCAAATCTATCTCTTCAGCTACCC 921 Query 33818 AAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAA 33877 |||| |||| | | |||||| ||||| | ||| | ||| | |||||||||||||||| Sbjct 922 AAAAGCATGCTTGTTGCTTTTTGTACATTTCCCAAACGTCGTGGTATTGGATTGGGAAAA 981 Query 33878 TAACAAATCT 33887 ||| ||||| Sbjct 982 GAACGAATCT 991 >seq3443 Length=346 Score = 105 bits (116), Expect = 8e-18 Identities = 195/286 (68%), Gaps = 0/286 (0%) Strand=Plus/Minus Query 63372 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCG 63431 || |||||||||| ||| | || || | ||| |||| || ||| || | |||||| Sbjct 315 CCGCCCTGATCTACGTAACGCGCAGTATCGTTAAAAACCTGCAGCATGGGCACAATACCA 256 Query 63432 TTTGATATACCATTGGTACCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 63491 || || | ||||||||||| | |||||| || |||| || | ||| || || Sbjct 255 TTGGAAGTCCCATTGGTACCTGCGATATAAGAACCTGTGGCCCGTACATTGTGTATGGAA 196 Query 63492 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATA 63551 |||||||| || || || || || ||| ||| | |||||| ||| ||||| ||| Sbjct 195 AGACCTATCCCGCCAGCAGATTGTGAAATTTTTGCCGTTTGTTTTAGCGTATCATAAATA 136 Query 63552 CCCTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 63611 || || || ||||| || |||| | || ||||| |||||||| | | Sbjct 135 CCATCAATACTATCGTCCTTCATTGCCAAAAGGAAACAAGAGGACATTTGAGGTTTAGGG 76 Query 63612 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTT 63657 || |||| |||||| |||||||| | |||||| ||||| | |||| Sbjct 75 GTACCCGAATTAAACAAGGTAGGTGTAGCGTGGGTAAAATACTTTT 30 >seq14334 Length=297 Score = 89.7 bits (98), Expect = 6e-13 Identities = 181/263 (69%), Gaps = 7/263 (3%) Strand=Plus/Plus Query 33629 GAAATCCGTAGAAACATCTAGCCTCGGTAATCTGTACTTCTGT-ACAAAATCGTTCCGCC 33687 |||| |||||||| | | ||||||| | || ||||| | || |||| ||| || Sbjct 1 GAAAACCGTAGAAGAACTTTGCCTCGGCATATTGAACTTCACTTACGAAATT-TTCAGCT 59 Query 33688 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 33747 | |||||||||||| || || ||| || ||||| ||||| | | ||||||||| ||| Sbjct 60 AGATTTTCATTCACAATACCATCAGATGCAGCAAAGAACGCTAGAATATGTTTTATGAAA 119 Query 33748 TATTTTTCGTCTGGTGTT--AGT--TTATTCCAATCATTGATATCTTTAGATATATCTAC 33803 || ||| || | | || | | || |||||||||| | ||| | | |||| Sbjct 120 TAACGTTCATC-GCTATTCAACTTGTTGGTCCAATCATTAAGATCCGTGTGCAGGTCTAT 178 Query 33804 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATA 33863 |||||| | |||||||| ||||| ||||| ||| | ||| | |||| | Sbjct 179 TTCTTCAGCAGTCCAAAAACTAGCCTCACATTTTTTGTACCAATCCCACAAATCATGGTG 238 Query 33864 TTGGATTGGGAAAATAACAAATC 33886 || ||| |||||||||||||||| Sbjct 239 TTTGATAGGGAAAATAACAAATC 261 >seq17866 Length=285 Score = 86.0 bits (94), Expect = 8e-12 Identities = 148/210 (70%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 62858 ATCAAA-TCGCCCATCTATTACAAACATGTTCAAG-GCAACAGATGCCAGATTACAAACG 62915 |||||| ||||| ||| | | |||||| | ||| |||| || |||| |||||| || Sbjct 27 ATCAAACTCGCCATTCT-TAATAAACAT-TGGAAGTGCAATGGAAGCCAAATTACATACT 84 Query 62916 GCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATA 62975 || ||||||| | | ||||| | ||| || || ||||| || | ||| Sbjct 85 GCCACCTCATCCGGGGAAGTATATTCCAATATTTCCGTACAAAGGTTGGACGAGCGAATA 144 Query 62976 GTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGA 63035 || |||||||| ||||| || |||||| | || |||||||||||||| || |||| Sbjct 145 GTACCTAAATTCTGTTGGTTGCTCTTTCTATTGGCGGCATCCTTATAAAGCATATATGGC 204 Query 63036 GTACCAGTTTCAATCTGAGATTCTATAATC 63065 |||||||| || || || || || | |||| Sbjct 205 GTACCAGTCTCTATTTGTGACTCCAAAATC 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622097250840320