Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq59922 288 3e-72 seq75063 253 5e-62 seq70280 205 2e-47 seq3443 100 7e-16 seq60379 98.7 3e-15 seq61998 86.0 2e-11 >seq59922 Length=6033 Score = 288 bits (318), Expect = 3e-72 Identities = 915/1393 (66%), Gaps = 37/1393 (3%) Strand=Plus/Plus Query 363442 ATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGAT 363501 |||| |||||||| || || ||||| ||||||||| || |||| || || ||| Sbjct 1738 ATTGCAGAACGCCCACAACAAATGTTGATGCGTGTTTCTGTTGGAATTCACAAAAAAGAT 1797 Query 363502 GTTGATGCCGCGATTGAAACATATAAGCTTCTAAGT--GCTCGTGTATTCACGCACGCCA 363559 | || | || ||| | ||||| || ||| | || | | ||||| ||||| | Sbjct 1798 ATCGACTCTGCAATTAAGACATACAA-CTTA-ATGTCAGAAGGATGGTTCACACACGCAA 1855 Query 363560 CGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAA 363619 | ||||| ||| || ||||||| | || ||||| ||||| ||||| || ||| ||| Sbjct 1856 CACCAACGTTGTTTAACTCTGGAACGCCAAAACCACAAATGTCATCTTGTTTCCTTTTAA 1915 Query 363620 AAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTT 363679 ||||||||| ||| || || || || | ||||||| | || | ||||||| || | Sbjct 1916 CAATGAAGGAAGATAGTATTGAAGGAATTTATGACACATTAAAACAATGTGCTCAGATCT 1975 Query 363680 C-CAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGC-ACAGAA-CAGTT 363736 | ||| | || || |||||||| | | || ||||| | ||||| |||| || | Sbjct 1976 CTCAATCA-GCTGGTGGAATTGGATTGGCTATGCACAACATCCGTGCGACAGGTTCA--T 2032 Query 363737 ACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796 |||| || ||| || || || || | ||||| ||| | | || ||| || Sbjct 2033 ACATCAAAGGAACAAACGGTGCTTCTAACGGTATCGTTCCAATGTTAAGAGTATTTAACG 2092 Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATC 363856 ||||||| || ||||| || || ||||||||||| || ||||| | || || ||||| Sbjct 2093 ATACTGCTAGATACGTAGATCAAGGTGGAGGAAAACGTAAAGGTTCTTTCGCAATGTACT 2152 Query 363857 TCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAA-CACGGGAAA- 363914 | |||||| ||||| ||| | ||||| || | || | |||||| ||||| ||| Sbjct 2153 TGGAGCCTTGGCATGCTGATGTATTTGACTTCTTAGACTTGAAGAAAAATCACGGTAAAG 2212 Query 363915 -AGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGA 363973 |||| || | ||| | ||| | || || || | |||||| | || || ||| Sbjct 2213 AAGAGCAAA---GAGCAAGAGATTTATTTTACGCTTTGTGGGTTCCAGATTTATTCATGC 2269 Query 363974 AGCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTT 364033 | || ||| | | | | | ||| | | | || || |||||||| |||||||||| Sbjct 2270 AACGTGTGAAAGAAAATGGAGAGTGGACTTTAATGTGTCCGCACGAATGCCCAGGTCTTT 2329 Query 364034 CCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAATCGG-AGGGAAAG 364092 | ||||| ||| || | | || | ||| ||||| ||| | |||||||| Sbjct 2330 CAGATGTGCACAGTGCTGAATTCGAAGCGTTGTACACGAAGTACGAAAAAGCAGGGAAAG 2389 Query 364093 GCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAG 364152 | | || ||||| ||||| | || ||||| ||| | || || || |||||| Sbjct 2390 GAA-GAAAAACAATCAAAGCACAAGACCTTTGGTTCAAAATCTTAGAATCTCAAATTGAG 2448 Query 364153 ACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGC-AAGTCCAACCAGCAGCA 364211 ||||| || || || ||||||||||||||| | ||||| | | || || ||||| || | Sbjct 2449 ACAGGTACTCCTTACATGTTGTACAAAGATGC-TGCAAACTCAAAATCAAACCAACAAAA 2507 Query 364212 CCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGA 364271 | | ||||||||| || ||| ||||||| |||||||| || ||||| || || || Sbjct 2508 CTTAGGTACAATTAAGTCTTCAAACTTATGTACTGAGATTATAGAGTACACTGCGCCAGA 2567 Query 364272 CGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAA---AAGATGG 364328 ||| ||| || |||||| | || || | || | || | ||| | | || || Sbjct 2568 TGAGGTTGCAGTTTGTAACTTGGCTTCTTTAGCATTGCCTAAATATGTTACTGATGAAGG 2627 Query 364329 TACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAA 364388 | || || ||| | | | | || ||||| || || || || | || | | || Sbjct 2628 GAAATTCGATCACGACAAATTGTTCGAGGTAACGTACCAAGCGACATTGAACTTGAATAA 2687 Query 364389 GGTTATCGACAAGAATTATTATCCAATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCG 364448 | || || || | || ||| || ||||| | ||||| |||||||| || Sbjct 2688 AATCATTGATGGTAACTTCTACCCAGTTGAAGAAGCTAAAAACTCTAACATGCGTCACCG 2747 Query 364449 CCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAA---GA-TGG 364504 || ||||| | ||||| || || | || || | ||| || || || || || Sbjct 2748 TCCAATTGGATTAGGTGTTCAAGGGTTAGCAGATGCTTTCAT----CTTAATGGGATTGC 2803 Query 364505 CATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTG 364564 ||||||| || || || | | | || | || | |||||||||||||||| | Sbjct 2804 CATTTGAATCAGAAGAAGCAAGAGCATTGAACAGAGAAGTTTTTGAAACAATGTATTACG 2863 Query 364565 CCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAGTACTCTACTTATGAGG 364624 | |||||||||| || ||||| || ||| | ||| ||| ||||||| | Sbjct 2864 CTTCAATGACTGCATCTAAAGATTTAGCTAAAGTTGATGGACCATACCAATCTTATGAAG 2923 Query 364625 GGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCC 364684 | || || |||| | || ||||||| || ||| | |||||||| || ||| | | Sbjct 2924 GATCGCCAGTTTCAAAAGGTCAATTCCAATTCGATATGTGGAATGTTACTCCAACAAGCA 2983 Query 364685 GATGGAACTGGGA--TACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCT 364742 ||||| | ||||| || | | | | || | | |||| ||| || |||| | | Sbjct 2984 GATGGGAATGGGACGTATTGAAAG--CAGAAGTGATGGAGCACGGTGTGCGTAACT-CAT 3040 Query 364743 CGTTA-CAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCT 364801 |||| || || ||||| || ||||| || || || ||||| ||||||||||| || | Sbjct 3041 TGTTATTGGCACCAATGCCAACAGCTTCAACAGCTCAAATCCTTGGAAACAACGAATGTT 3100 Query 364802 TCGAACCGTTTAC 364814 ||||||| | ||| Sbjct 3101 TCGAACCATATAC 3113 Score = 158 bits (174), Expect = 3e-33 Identities = 447/678 (66%), Gaps = 9/678 (1%) Strand=Plus/Plus Query 22276 TCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAAT 22335 || ||| |||| || | ||||| | || |||||| || | ||| | ||||||| Sbjct 489 TCAGAAGTTCAGTATACTGAGGCAAAATTTTTCTACGGGTTCCAAGTAGCAGTTGAAAAC 548 Query 22336 GTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAACAA 22395 ||||| | ||||| ||||| | | || | | | | |||| | || | |||| Sbjct 549 ATTCACTCTGAAACGTATTCGCTTTTAATAGATACTTACATTAAAGACAC-GAAGGACAA 607 Query 22396 CGAA-ACTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGC 22454 ||| | || || || ||| ||| || ||| ||||| || ||||||||||| Sbjct 608 AGAATATTTGTTTAATGCTATTGACACAATGGAATGTGTTAAGGTAAAAGCAGATTGGGC 667 Query 22455 GCTGAAATGGATGAACAATGAACGTTCATTCGCGGAACGTCTTATTGCATTTGCTGTGGT 22514 || ||||| | |||| | ||||| || ||| | ||| |||||||||| | || Sbjct 668 TTTGCGTTGGATTGA---TGAAGGATCATTTGCAGAAAGACTTGTTGCATTTGCAGCAGT 724 Query 22515 TGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAAT 22574 ||||| |||||||| || || | || ||| |||| | ||| | || ||| | | | | Sbjct 725 GGAAGGAATTTTCTTCTCAGGTTCTTTCTGTTCAATTTACTGGTTGAAGAAAAGAGGACT 784 Query 22575 TATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGA 22634 ||||| || || | || || || |||||||| |||| || || | || || Sbjct 785 GATGCCAGGGCTTTCTTTCTCTAACGAGTTAATCTCAAGAGACGAAGGATTGCACTGTGA 844 Query 22635 TTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATATGAAACTGTACT 22694 ||| || ||| | |||| || || ||| || ||||||||||| | ||||| || | Sbjct 845 TTTCGCATGTTTATTATACACCAACCACATCGTTGATAAACTTCCAAAGGAAACAGTTCA 904 Query 22695 TGATATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGC-GTTACCAG 22753 | ||||| | ||||||||| |||| ||||||| || || || || Sbjct 905 GAAAATTATCCTTGACGCAGTTGAAATTGAGAAAGAATTTATTCTTGAAGCACTTCCCGT 964 Query 22754 TAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGTTGCAGATC 22813 ||||| | || || || || || | ||| ||| ||| | |||||||| ||| Sbjct 965 TAAGT-TAATCGGAATGAACAGTGATTTGATGTCGCAATACATTGAGTTTGTTGCTGATA 1023 Query 22814 GTCTATTAATTTCACTCGGTTATG-CAAAGCATTATAACGTCGTTAATCCATTTGAATGG 22872 | |||| | | | || | | |||| ||| |||| || |||||||| | Sbjct 1024 GATTATTGTTGGAATTAGGAAACGAAAAAGTATT-CAACGCGACAAACCCATTTGATTTC 1082 Query 22873 ATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTTGGTGAATAC 22932 |||||| | |||||| || |||| || || || ||||| ||||| ||||||||||||||| Sbjct 1083 ATGGAAATGATTTCAATTCAAGGGAAAACGAACTTCTTTGAAAAGAGAGTTGGTGAATAC 1142 Query 22933 CAAAAAGCAGGTGTTATG 22950 |||||||| || ||| || Sbjct 1143 CAAAAAGCTGGAGTTTTG 1160 >seq75063 Length=1318 Score = 253 bits (280), Expect = 5e-62 Identities = 518/760 (68%), Gaps = 15/760 (2%) Strand=Plus/Minus Query 22197 ACATTTTATCAAATATATTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAA 22256 ||| || |||||||| | || || ||||| ||| | | || || || || ||||||| Sbjct 851 ACACTTCATCAAATACGTGCTTGCTTTCTTCGCTGCTTCTGATGGAATTGTCCTTGAGAA 792 Query 22257 TCT-AGTGACTAATTTTGCATCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTG 22315 ||| | ||| | || || ||||| | ||| ||| || | ||||| |||||||| Sbjct 791 TCTTATTGAATGCTTC-GCTGCTGAAGTACAAATCCCTGAAGTTAGATGCTTCTATGGCT 733 Query 22316 TGCAAATGATGATTGAAAATGTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCG 22375 | |||| ||||| || ||||||||| ||||| || ||| | | || | ||| Sbjct 732 TCCAAAGTATGATGGAGAATGTTCACAGTGAAACTTACTCTCTCCT--TATTGATACTTA 675 Query 22376 TAGAAGATAAAGACGAACAACGAAA----CTTATTCCGCGCGATTCGCACCATTCAATCA 22431 || || | | | || || | | ||| || | || ||| | ||| || | Sbjct 674 TATTAG-TGATCTCAAAGAAAAAGATTTCCTTTTTAAG-GCTATTGATAATATTGAAACT 617 Query 22432 ATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGAACAATGAACGT-TCATTCGCGGA 22490 ||||||| ||||| || ||||| | |||||||| || || ||| | ||||| || || Sbjct 616 GTTAAGAAGAAGGCTGACTGGGCTTTTAAATGGATTAATAA-GAATGACTCATTTGCTGA 558 Query 22491 ACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAAT 22550 | | | ||||| |||||| || ||||| |||||||| ||||| | ||||| ||||| Sbjct 557 AAGATTGATTGCGTTTGCTTGTGTAGAAGGAATTTTCTTCTCTGGGTCTTTTTGCGCAAT 498 Query 22551 CTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAG 22610 || ||| | ||||| | | ||||||| || || || || |||||||| || Sbjct 497 TTTCTGGTTGAAAAAGAGATCTCTTATGCCAGGCCTTTGTTTCTCTAATGAGTTGATCTC 438 Query 22611 CCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCA 22670 |||||||||| | ||||| || ||||| ||| || | ||| || ||||| || | Sbjct 437 AAGAGATGAGGGATTACATACTGACTTTGCTTGTTTGTTGTAT---AAACATATGGTTAA 381 Query 22671 TAAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCT 22730 ||| | || |||||| | ||| ||| | || | ||||| | | |||| | | Sbjct 380 TAAGGTATCAAATGAAAGAATTTATGAAATTTTGACTGAAGCAGTAGCAATTGAGCTTGA 321 Query 22731 ATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTAC 22790 |||| | | || | || || ||| || |||||||| ||| | || ||| | Sbjct 320 ATTTGTATCTGAATCTTTGCCCGTAGAACTTATTGGTATGAATAGCAAACTTATGGGACA 261 Query 22791 ATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAA 22850 ||||||| | |||||||| ||| | || | || | || || ||||||| | || Sbjct 260 ATATATTGAGTTTGTTGCTGATAGACTTCTCTTTACTCTTGGAGTACCAAAGCACTTCAA 201 Query 22851 CGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTT 22910 | ||||||||||| ||||||||||| | ||||||||| ||||||| || |||||||| Sbjct 200 TGCAGTTAATCCATTCGAATGGATGGACATGATTTCACTTCAAGGAAAAACTAATTTCTT 141 Query 22911 CGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATG 22950 ||||| || ||| |||| || ||||||||||| |||||| Sbjct 140 CGAAAGAAAAGTAAGTGAGTATCAAAAAGCAGGGGTTATG 101 >seq70280 Length=1721 Score = 205 bits (226), Expect = 2e-47 Identities = 450/668 (67%), Gaps = 16/668 (2%) Strand=Plus/Minus Query 111278 ATTTGGAGAAACAATGCGTTTTAATCTGTCAACTCATTTTCCACTTCTCACAAC-AAAG- 111335 ||||||| | |||||||| | |||| ||| || || || ||||| || |||| Sbjct 848 ATTTGGATACCAAATGCGTTATGATCTCTCAGAGAGCTTCCCTCTCCTCACTACTAAAGA 789 Query 111336 CGAACATATTGGAAGGGAATTGTCGAAGAACTTCTGTGGTTTATTCGCGGAAGTACAAAT 111395 || | || ||||||||| |||| ||||| || | ||||| || | || |||||| Sbjct 788 CGTA--TACTGGAAGGGAGTTGTAGAAGAGCTCTTATGGTTCCTTAGAGGGGAAACAAAT 731 Query 111396 GCAAA-----TGAACTTGCAGCAAAAAATGTAAAAATTTGGGATGGAAATGGATCACGTG 111450 ||| ||| ||| ||| || || ||||| |||||||| || || ||| | | Sbjct 730 TCAACAACCCTGAGTTTG----AAATAAAGTTAAAATCTGGGATGGTAACGGCTCAAGAG 675 Query 111451 ACTTTCTAGATTCAGTTGGTCTTGTCGACAACGAAGAAGGTGATCTCGGACCAGTTTACG 111510 | ||||| ||| ||| || || | |||||||||||||| |||||||| || | Sbjct 674 AATTTCTTGATAACAATGGATTTACAGAAAGAGAAGAAGGTGATCTTGGACCAGTATATG 615 Query 111511 GATTTCAATGGCGCCACTTTGGTGCAGACTACAAAACCATGCACGACTCATATGATTCAC 111570 | || |||||| | |||||||| || || || || || ||||| || ||||| || Sbjct 614 GTTTCCAATGGAGACACTTTGGAGCTGAATATAAGACTATGCATGATGACTATGAAGGAC 555 Query 111571 AGGGAACTGATCAATTACAGAATGTCATTGATCAAATTAAGAACAACCCAACTTCTCGTC 111630 | ||| |||||| | ||||| | ||| | | | || | || ||||| ||| Sbjct 554 AAGGAGTCGATCAAATTAAGAATATTATTAAAGACCTCAAAGAGAATCCAACCAGTCGAA 495 Query 111631 GCATTATTATGAGTGCATGGAACCCAAATGCATTGGAAAAAATGGCACTTCCACCATGTC 111690 | |||||| | | ||||||||| || || | || ||||| || ||||| || | Sbjct 494 GAATTATTCTTAATGCATGGAATGTTGCTGACTTAAAGAAGATGGCTCTACCACCTTGCC 435 Query 111691 ATCTTATGTGCCAGTTTTATGT--ACACGACGGGATGCTT-TCATGCCAAATGTATCAGC 111747 || | || |||||||| ||||| | || | | || || || || |||||||| Sbjct 434 ATATCATCTGCCAGTTCTATGTTGATACTAAAAATAGATTATCCTGTCAGATGTATCAAA 375 Query 111748 GATCTGCTGATATTGGTCTTGGTGTTCCGTTTAATATTGCAAGTTACGCACTACTTACTT 111807 | | |||||||||||| || || || || ||||| || ||||| ||||| || | Sbjct 374 GGAGTTGTGATATTGGTCTAGGAGTACCATTCAATATAGCTAGTTATAGTCTACTCACCT 315 Query 111808 GCTTAATCGCTCATTTTACAAATCTCAAACCGGGTGAATTCATTCACGTTATCGGAGATG 111867 || | || ||||| || | || || ||||||||||||||| | | ||||| | Sbjct 314 GCATGATTGCTCAGATTTGAGGCCTTGAAAGAGGTGAATTCATTCACACTTTAGGAGACG 255 Query 111868 CGCATGTTTACACAAACCACATTGATGCACTTAAAACACAGTTGAAGCGCAAACCATACG 111927 | ||||| |||| ||| || | | ||||||||| |||||| ||| | | ||| | Sbjct 254 CTCATGTATACAAAAATCATGTGAAGCCACTTAAAAGACAGTTAAAGAGGTATCCAAATC 195 Query 111928 ATTTCCCA 111935 ||||||| Sbjct 194 CTTTCCCA 187 >seq3443 Length=346 Score = 100 bits (110), Expect = 7e-16 Identities = 214/312 (69%), Gaps = 6/312 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCT 363606 || || ||||| || || || ||| ||| | || || | ||| || || ||||| ||| Sbjct 38 TTTACCCACGCTACACCTACCTTGTTTAATTCGGGTACCCCTAAACCTCAAATGTCCTCT 97 Query 363607 TGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAAT 363666 || || ||| | ||||||||||||| || || ||||| | ||| || || || | Sbjct 98 TGTTTCCTTTTGGCAATGAAGGACGATAGTATTGATGGTATTTATGATACGCTAAAACAA 157 Query 363667 TGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTG-C 363725 || ||||| | ||| ||||| || ||| | || || |||||||| || | | Sbjct 158 ACGGCAAAAATTTCACAATCTGCTGGCGGGATAGGTCTTTCCATACACAATGTACGGGCC 217 Query 363726 ACAGAACAGTTACATTCGC-GGCA-CAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 |||| ||| | |||| || | || |||| || ||||| | || |||||||| Sbjct 218 ACAG-GTTCTTATA-TCGCAGGTACCAATGGGA-CTTCCAATGGTATTGTGCCCATGCTG 274 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 | || ||| || |||||||| | ||||| || ||||| || |||||||| || || Sbjct 275 CAGGTTTTTAACGATACTGCGCGTTACGTAGATCAGGGCGGTGGAAAGCGTAAGGGTAGT 334 Query 363844 TTTGCTATGTAT 363855 |||||||| ||| Sbjct 335 TTTGCTATCTAT 346 >seq60379 Length=4852 Score = 98.7 bits (108), Expect = 3e-15 Identities = 149/211 (71%), Gaps = 6/211 (3%) Strand=Plus/Minus Query 111598 TTGATCAAATTAAGAACAACCCAACTTCTCGTCGCATTATTATGAGTGCATGGAACCCAA 111657 ||||| || |||||||| || | ||| || ||| ||| ||||||| |||||||| Sbjct 1716 TTGATGGTATCAAGAACAATCCGAATTCGCGCCGCCACATTGTGAGTGCTTGGAACCC-- 1659 Query 111658 ATGCATTGGAAAAA---ATGGCACTTCCACCATGTCATCTTATGTGCCAGTTTTATGTAC 111714 ||| ||| | | ||||| | || ||||||||| | ||| ||||||||||| Sbjct 1658 -TGCTCTGGTAGACGAGATGGCTTTGCCGCCATGTCATTGTCTGTTTCAGTTTTATGTCG 1600 Query 111715 ACGACGGGATGCTTTCATGCCAAATGTATCAGCGATCTGCTGATATTGGTCTTGGTGTTC 111774 ||||| | |||||||||||| | |||||||| || || ||||| | | ||||| | Sbjct 1599 CGGACGGCAAGCTTTCATGCCAGCTCTATCAGCGTTCGGCGGATATCTTTTTAGGTGTGC 1540 Query 111775 CGTTTAATATTGCAAGTTACGCACTACTTAC 111805 | || ||||| || || || || ||||| Sbjct 1539 CATTCAATATCGCGTCCTATGCGCTTCTTAC 1509 >seq61998 Length=3429 Score = 86.0 bits (94), Expect = 2e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 27235 TACGAAGGCGCAATTGTTATTGATGCAAAATCGGGGTTTTATACGGATCCAGTCGCCACA 27294 |||||||| || | ||||||||| ||| | || | ||| || || ||| | ||||| Sbjct 1706 TACGAAGGAGCTACAGTTATTGATCCAATTGCTGGATATTACACAGACCCAATTGCCACC 1765 Query 27295 CTTGACTTTGCATCACTATATCCATCAATTATGCTTGCTCACAATTTATGTTACTCAACC 27354 | || ||||| || |||||||| || || ||| | ||||| ||||||||||| ||||| Sbjct 1766 TTAGATTTTGCTTCTCTATATCCTTCGATCATGATGGCTCATAATTTATGTTATTCAACT 1825 Query 27355 TT 27356 || Sbjct 1826 TT 1827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1301530846956864