Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq97248 93.3 4e-14 >seq97248 Length=461 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATC-GCTCATGGTGCGCGAGTC 131081 || || ||||| | || ||||| || |||||||||||||| | | ||| | | | || Sbjct 394 AGGACCAAATGAAGAGTGGACTCTTTCTGAATGTTGTAATCAGATAATGTTCTTCCA-TC 336 Query 131082 CTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTC 131141 |||| ||||| || ||| |||| || | ||| || || || ||||| ||||||||||| Sbjct 335 TTCTAATTGCTTTCCAGCGAAGATCAATCTCTGTTGATCTGGTGGGATGCCTTCTTTGTC 276 Query 131142 GGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201 || || ||||| | || | |||||| | ||| | || | ||||| || Sbjct 275 TTGAATCTTAGTCTTGACGTTGTCAATAGTATCTGATTGCTCAACATCTAAGGTAATTGT 216 Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||||| |||| ||| |||||||| || ||||| Sbjct 215 CTTACCAGTTAAAGTCTTTACGAAGATTTGCAT 183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471368785735680