Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_008201.1 Length=34525 Score E Sequences producing significant alignments: (Bits) Value seq83109 80.6 6e-11 >seq83109 Length=851 Score = 80.6 bits (88), Expect = 6e-11 Identities = 150/219 (68%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 29686 TTACCTTGACTGCTCCGTCTAAGTATCACGCAATGCTTTCAAGAACCAGTAGCGTGAACC 29745 |||| || || ||||| ||| |||||||| | |||||| | ||| || | Sbjct 313 TTACTTTAACCGCTCCTAGTAAATATCACGC---GGTTTCAAA---CGGTAAATCAAATC 366 Query 29746 CGAAATGGAATGGAGCAAGCCCTGCGGAAACACAGGTTTACCTTGTGAATACTTGGGCGA 29805 | || |||||||| | ||| ||||| || | ||| | |||| ||| ||||||| Sbjct 367 CAAAGTGGAATGGCTGCACACCTAAAGAAACTCAAGCTTATTTAGTGAGTACATGGGCGA 426 Query 29806 AAATCCGTGCCAAACTCAACCGTGAGGGCGTAATGGCTTACGGTTTTCGAGTGGCTGAAC 29865 |||| || || || | || ||| | ||| | | ||| ||| |||| || |||||| Sbjct 427 AAATTCGCGCTGAATTAAAGCGTAAAGGCATTACTTATTATGGTGTTCGGGTAACTGAAC 486 Query 29866 CTCACGCTGACGCTACCCCACACTGGCATTTAATTCTAT 29904 ||||| ||| || |||||||| ||||| ||| || ||| Sbjct 487 CTCACCATGATGCAACCCCACATTGGCACTTACTTTTAT 525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110215355649088