Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq59922 345 5e-90 seq75063 206 3e-48 seq3443 129 7e-25 seq14334 93.3 5e-14 seq17866 82.4 1e-10 >seq59922 Length=6033 Score = 345 bits (382), Expect = 5e-90 Identities = 950/1438 (66%), Gaps = 37/1438 (3%) Strand=Plus/Minus Query 62561 ATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAG 62620 || || || |||||||| ||||||||||| | || || || | || | | | |||||| Sbjct 2789 ATGAAAGCATCTGCTAACCCTTGAACACCTAATCCAATTGGACGGTGACGCATGTTAGAG 2730 Query 62621 ATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTC--TGA 62678 ||| ||||||| || || || | ||| ||| || |||||||| | | ||| || Sbjct 2729 TTTTTAGCTTCTTCAACTGGGTAGAAGTTACCATCAATGATTTTATTCA-AGTTCAATGT 2671 Query 62679 CAATT---ACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCGCCCATCTATTACAA 62735 | || || || || || || |||| ||| ||| ||| || || | | Sbjct 2670 CGCTTGGTACGTT----ACCTCGAACAATTTGTCGTGATCGAATTTCCCTTC-ATCAGTA 2616 Query 62736 ACATGTT----CAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCATCCGCA 62791 |||| || |||||| | ||| |||| |||||||| || ||||||| | | | Sbjct 2615 ACATATTTAGGCAATGCTAAAGAAGCCAAGTTACAAACTGCAACCTCATCTGGCGCAGTG 2556 Query 62792 TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTA 62851 || | ||| |||||||| || | || | |||| || || ||||| |||||||| || Sbjct 2555 TACTCTATAATCTCAGTACATAAGTTTGAAGACTTAATTGTACCTAAGTTTTGTTGGTT- 2497 Query 62852 CTCTTTTTG---TTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGA 62908 | ||||| || || ||||| || || | ||| | |||||||| || ||||| ||| Sbjct 2496 -TGATTTTGAGTTTGCA-GCATCTTTGTACAACATGTAAGGAGTACCTGTCTCAATTTGA 2439 Query 62909 GATTCTATAATCGCTTT---CCAGACGACTCGAGCCTTTATTATAGATTTGTATCTCTTT 62965 ||||||| || ||| ||| | | || | || || ||| | | | | || | Sbjct 2438 GATTCTAAGAT---TTTGAACCAAAGGTCTTGTGCTTTGATTGTTTTTCTTCCTTTCCCT 2382 Query 62966 TCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCA 63025 || ||||||| || ||||| |||||| || | | |||| || || Sbjct 2381 GCTTTTTCGTACTTCGTGTACAACGCTTCGAATTCAGCACTGTGCACATCTGAAAGACCT 2322 Query 63026 GGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAG 63085 || ||||| | ||||||||| || | ||||||||| | || ||||| |||| ||| || Sbjct 2321 GGGCATTCGTGCGGACACATTAAAGTCCACTCTCCATTTTCTTTCACACGTTGCATGAAT 2262 Query 63086 AGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTA 63145 | ||| |||| ||| | ||| ||||| |||||| | ||| || || || || || | Sbjct 2261 AAATCTGGAACCCACAAAGCGTAAAATAAATCTCTTGCTCTTTGCTCTTCTTTACCGTGA 2202 Query 63146 TTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCC 63205 || || || | || | ||| | | | ||||| |||||| || |||||||| || || Sbjct 2201 TTTTTCTTCAAGTCTAAGAAGTCAAATACATCAGCATGCCAAGGCTCCAAGTACATTGCG 2142 Query 63206 ATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACT 63265 | | || ||||| ||| || ||||||| ||||||||| || | ||| | ||| Sbjct 2141 AAAGAACCTTTACGTTTTCCTCCACCTTGATCTACGTATCTAGCAGTATCGTTAAATACT 2082 Query 63266 CTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTG 63325 || |||||||||| ||||| || || | ||| || || ||| ||| || || | Sbjct 2081 CTTAACATTGGAACGATACCGTTAGAAGCACCGTTTGTTCCTTTGATGTATGAACCTGTC 2022 Query 63326 GCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCAT 63385 ||||| || || || | | || ||||| || || || |||||| || ||| Sbjct 2021 GCACGGATGTTGTGCATAGCCAATCCAATTCCACCAGCTGATTGAGAGATCTGAGCACAT 1962 Query 63386 CGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCAT-GTTAAGTAGAAAACA 63444 ||||||| || ||||| || || || |||||||| ||| |||| ||||| |||| | Sbjct 1961 TGTTTTAATGTGTCATAAATTCCTTCAATACTATCTTCCTTCATTGTTAAAAGGAAACAA 1902 Query 63445 GCTAGACATTTG--GTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTA 63502 | | |||||||| || | | ||||| | ||||| || || || | ||||| || Sbjct 1901 GAT-GACATTTGTGGTTTTGGC--GTTCCAGAGTTAAACAACGTTGGTGTTGCGTGTGTG 1845 Query 63503 AACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTGATGA 63562 |||||| ||| || | || ||||| |||| ||| || ||||| ||||| || ||| Sbjct 1844 AACCATCCTTCTGACATTAAGTTGTATGTCTTAATTGCAGAGTCGATATCTTTTTTGTGA 1785 Query 63563 ATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTTTATT 63622 ||||| || | |||||||| ||||| || || || | ||| | ||| | ||| | | Sbjct 1784 ATTCCAACAGAAACACGCATCAACATTTGTTGTGGGCGTTCTGCAATCATTCCGTTCAAT 1725 Query 63623 TTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGT 63682 |||| | ||| || ||| ||||||||||||||||||| |||| ||| |||| Sbjct 1724 TTCATTAGGTACGAGCGCGTCAACGTTTTAAAACCAAAATAGTCGTATCTAAAATCTCTA 1665 Query 63683 TCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATC--CATGGTAA 63740 |||||||| || || | || || |||| || | | | || | || Sbjct 1664 TCGTAAATGATGCTTGAATCAAGACGGTCTTTATTTTCCATCATGATCTCGTAAACGTCG 1605 Query 63741 TACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATCCT 63800 | || || |||| | || || ||| |||| |||| | || | | | ||| Sbjct 1604 T-CTGCAACTAAT-GATGCATTTTCTCCAGTTTTTGGATCAATGTAATCGTGCATATCTG 1547 Query 63801 CCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAG 63860 ||| |||||| || | || |||||||||||||| | |||||||| || || | | Sbjct 1546 TCATTACTTCAGAGAAAACCTTCTTTGTTTCTTTGTGCAAGTTTGATACAGCAATACGTG 1487 Query 63861 CGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCA 63920 || | | |||||||| ||||| | | || | ||||| | ||| ||||| | Sbjct 1486 AAGCCAACAACGCATAATCAGGATGATCAATTGTTTTTGCCGCTGCCACTTCAGCTGCAA 1427 Query 63921 GAGTGTCCAATTCTACCGTTGTTACACCATTATATATTCCTTGGATAACCTTCATAGC 63978 | |||| |||| | ||||| || |||| | | | |||| || |||||||| || Sbjct 1426 GGTTGTCTAATTGTGTTGTTGTAACTCCATCAAACAACCCTTCAATTACCTTCATGGC 1369 Score = 340 bits (376), Expect = 2e-88 Identities = 627/903 (69%), Gaps = 21/903 (2%) Strand=Plus/Minus Query 32357 CATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTC 32416 || |||||| ||||||||||||||| || | ||||| || || || ||||| |||| Sbjct 1160 CAAAACTCCAGCTTTTTGGTATTCACCAACTCTCTTTTCAAAGAAGTTCGTTTTCCCTTG 1101 Query 32417 TAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCC 32476 | ||| || ||||||||||||| ||||| || || | || | | ||||| ||| Sbjct 1100 AATTGAAATCATTTCCATGAAATCAAATGGGTTTGTCGCGTTGAATACTTTTTCGTTTCC 1041 Query 32477 CAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATT 32536 ||||| | | |||||||| || ||||| || || ||| ||||| |||| || Sbjct 1040 TAATTCCAACAATAATCTATCAGCAACAAACTCAATGTATTGCGACATCAAATCACTGTT 981 Query 32537 CATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGC 32596 |||||| || | ||||| ||||| || || || |||||||| ||||| || || Sbjct 980 CATTCCGATTAACTTAACGGGAAGTGCTTCAAGAATAAATTCTTTCTCAATTTCAACTGC 921 Query 32597 GTCTGTTATAATAGATCTTA-CTGTTTCTTCACTCGGTGGATACAATAAATGTTTAA--- 32652 ||| ||||| ||| | ||||||| | || || | | || || Sbjct 920 GTCAAGGATAATTT-TCTGAACTGTTTCCTTTGGAAGTTTATCAACGATGTGGTTGGTGT 862 Query 32653 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 32712 | | |||||||||||||| ||||| | || |||||||| ||||| ||||| || | Sbjct 861 ATAATAAACATGCGAAATCACAGTGCAATCCTTCGTCTCTTGAGATTAACTCGTTAGAGA 802 Query 32713 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCA--AAATATGGACGCAAATGATCC 32770 | | || || ||||| || || | || || | ||| |||| || || ||| || || Sbjct 801 AAGAAAGCCCTGGCATCAGTCCTCTTTTCTTCAACCAGTAAAT-TGAACAGAAA-GAACC 744 Query 32771 AGAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCT 32830 || |||||||||||||| ||||| ||||| |||| |||||| ||| || | | | Sbjct 743 TGAGAAGAAAATTCCTTCCACTGCTGCAAATGCAACAAGTCTTTCTGCAAAT---GATCC 687 Query 32831 GTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 32890 |||| ||||| ||||||||| || || || ||||| |||||| || || Sbjct 686 TTCATCAATCCAACGCAAAGCCCAATCTGCTTTTACCTTAACACATTCCATTGTGTCAAT 627 Query 32891 AGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACT 32950 ||||||||| | ||| | ||| || || | ||||||| || ||||| || ||||| Sbjct 626 AGCATTAAACAAATATTCTTTGTCCTTCGTGTCTTTAATGTAAGTATCTATTAAAAGCGA 567 Query 32951 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTC 33010 |||| |||| || ||||||||||||| || | ||| || |||||||| || | ||||| Sbjct 566 ATACGTTTCAGAGTGAATGTTTTCAACTGCTACTTGGAACCCGTAGAAAAATTTTGCCTC 507 Query 33011 GGTAATCTGTACTTCTGTACAAAATCGT-TCTGCTAAATTTTCATTCACTATTCCGTCAC 33069 ||| ||| ||||||| |||| | | |||||||| |||||||| || ||||| || Sbjct 506 AGTATACTGAACTTCTG-ACAAGAAATTCTCTGCTAAGTTTTCATTTACAATTCCATCTG 448 Query 33070 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAAT-ATTTTTCGTCTGGTGTTAGTT-- 33126 || || ||||| |||||||||||||| | ||||| | || | | || | || | Sbjct 447 ATGCCGCGAAAAAAGCCAATACATGTTTAACAAAATGACGTTCATTATCGT-TCAGCTTC 389 Query 33127 -TATTCCAATCATTGATATC-TTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGC 33184 ||| ||||||| | | || | || | ||| | ||||| ||||||| || || Sbjct 388 GTATCCCAATCAATTAAGTCGGCTTGA-AGATCAATCTCTTCGGCTGTCCAGAAACTAGC 330 Query 33185 CTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 33244 || |||||||| || | | ||| ||||||| | |||||||||||| | ||||||||| Sbjct 329 TTCGGCCTTTTTGTAGAAAGCCCAAATGTCATCGTGTTGAATTGGAAATAGAACAAATCT 270 Query 33245 ATT 33247 || Sbjct 269 GTT 267 >seq75063 Length=1318 Score = 206 bits (228), Expect = 3e-48 Identities = 607/925 (66%), Gaps = 28/925 (3%) Strand=Plus/Plus Query 32337 AAATGATTGTCT---TCTTGAGACATAACTCCCATTTTTTGGTATTCACCCACACGTTTT 32393 |||| |||||| |||| |||||||| || |||||| || |||| || | || Sbjct 78 AAATTCTTGTCTGTGTCTTTTGACATAACCCCTGCTTTTTGATACTCACTTACTTTTCTT 137 Query 32394 TCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATTGGTA 32453 ||||| ||||||||||| |||| | ||| || | ||||| | ||||||||||| Sbjct 138 TCGAAGAAATTAGTTTTTCCTTGAAGTGAAATCATGTCCATCCATTCGAATGGATTAACT 197 Query 32454 ACATTATAAAtttttttAAATCCCAA---TTCAGAAATCAATCTATCTGCGACAAATTCT 32510 |||| || | ||| | |||| | ||| | | |||||| || ||||| || Sbjct 198 GCATTG-AAGTGCTTTGGTACTCCAAGAGTAAAGAGA--AGTCTATCAGCAACAAACTCA 254 Query 32511 ATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCACAGTA 32570 |||||| | ||| | || | |||||| || ||||||| || || | || ||| Sbjct 255 ATATATTGTCCCATAAGTTTGCTATTCATACCAATAAGTTCTACGGGCAAAGATTCAGAT 314 Query 32571 AGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTCACTC 32630 | |||||| | ||||| | || || || || | ||| || || ||||| || Sbjct 315 ACAAATTCAAGCTCAATTGCTACTGCTTCAGTCAAAATT--TCATAAA--TTCTT---TC 367 Query 32631 GGTGGATAC---AATAA----ATGTTTAAACATCAAACATGCGAAATCGCAGTGTAGACC 32683 | ||||| | ||| ||||||| ||| |||||| || || || |||| || Sbjct 368 ATTTGATACCTTATTAACCATATGTTTATACAACAAACAAGCAAAGTCAGTATGTAATCC 427 Query 32684 CTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTT 32743 ||| ||||| || || || || || || || || ||||| || | |||||| Sbjct 428 CTCATCTCTTGAGATCAACTCATTAGAGAAACAAAGGCCTGGCATAAGAGATCTCTTTTT 487 Query 32744 AAGCCAAAATATGGACGCAAAT-GATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802 | ||| || || | |||||| || ||||| ||||||||||||||||| ||||| | Sbjct 488 CAACCAGAAAATTG-CGCAAAAAGACCCAGAGAAGAAAATTCCTTCTACACAAGCAAACG 546 Query 32803 CAATAAGTCTCTCTCCATAACCGGCGCTGTCATGTATCCACTTTTGAGCCCAATCGGCCT 32862 |||| | ||| || || | | | | | || ||||| || |||||| || |||| Sbjct 547 CAATCAATCTTTCAGCAAATGAGTCATTCTTATTAATCCATTTAAAAGCCCAGTCAGCCT 606 Query 32863 TCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACTAT 32922 |||| || ||| || | || ||||| ||||| || | | |||||| || || Sbjct 607 TCTTCTTAACAGTTTCAATATTATCAATAGCCTTAAAAAGGAAATCTTTTTCTTTGAGAT 666 Query 32923 CTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGCCA 32982 | ||| ||| |||||||| | ||| || |||| |||| || || || Sbjct 667 CACTAATATAAGTATCAATAAGGAGAGAGTAAGTTTCACTGTGAACATTCTCCATCATAC 726 Query 32983 TTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTG 33042 |||| || || |||||||||||| | || | || |||||||| | | || | ||| Sbjct 727 TTTGGAAGCCATAGAAGCATCTAACTTCAGGGATTTGTACTTCAGCAGCGAAGCATTCAA 786 Query 33043 CTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAA 33102 | ||| ||| || ||||| ||| || || || || || | || | ||| || | Sbjct 787 TAAGATTCTCAAGGACAATTCCATCAGAAGCAGCGAAGAAAGCAAGCACGTATTTGATGA 846 Query 33103 AATATTTTTCGTCTGGTGTTAGTTT---ATTCCAATCATTGATATCTTTAGATATATCCA 33159 | | | | || || ||| ||| ||||||||| || | |||| || | ||| | Sbjct 847 AGTGTCTCTCATCATCATTTAATTTATCATTCCAATCTTTTAAATCTGAAGCCAAATCTA 906 Query 33160 CTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGAT 33219 ||||| || |||||| |||| | | |||||| ||||| | ||| | ||| || | Sbjct 907 TCTCTTCAGCTACCCAAAAGCATGCTTGTTGCTTTTTGTACATTTCCCAAACGTCGTGGT 966 Query 33220 ATTGAATTGGAAAAATAACAAATCT 33244 |||| ||||| |||| ||| ||||| Sbjct 967 ATTGGATTGGGAAAAGAACGAATCT 991 >seq3443 Length=346 Score = 129 bits (142), Expect = 7e-25 Identities = 200/286 (70%), Gaps = 0/286 (0%) Strand=Plus/Minus Query 63227 CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCA 63286 || |||||||||| ||| | || || | ||| |||| || ||| || | ||||||| Sbjct 315 CCGCCCTGATCTACGTAACGCGCAGTATCGTTAAAAACCTGCAGCATGGGCACAATACCA 256 Query 63287 TTGGATGTACCATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGAT 63346 ||||| || |||||||| |||| |||||| || |||| || | ||| || || Sbjct 255 TTGGAAGTCCCATTGGTACCTGCGATATAAGAACCTGTGGCCCGTACATTGTGTATGGAA 196 Query 63347 AGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATG 63406 |||||||| || || || || || ||| ||| | |||||| ||||||||| || Sbjct 195 AGACCTATCCCGCCAGCAGATTGTGAAATTTTTGCCGTTTGTTTTAGCGTATCATAAATA 136 Query 63407 CCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTA 63466 || || |||||||| ||| |||| | || ||||| |||||||| | | Sbjct 135 CCATCAATACTATCGTCCTTCATTGCCAAAAGGAAACAAGAGGACATTTGAGGTTTAGGG 76 Query 63467 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTT 63512 || |||| |||||| |||||||| | |||||| ||||| | |||| Sbjct 75 GTACCCGAATTAAACAAGGTAGGTGTAGCGTGGGTAAAATACTTTT 30 >seq14334 Length=297 Score = 93.3 bits (102), Expect = 5e-14 Identities = 182/263 (69%), Gaps = 7/263 (3%) Strand=Plus/Plus Query 32986 GAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGT-ACAAAATCGTTCTGCT 33044 |||| ||||||||| | | ||||||| | || ||||| | || |||| ||| ||| Sbjct 1 GAAAACCGTAGAAGAACTTTGCCTCGGCATATTGAACTTCACTTACGAAATT-TTCAGCT 59 Query 33045 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 33104 | |||||||||||| || || ||| || ||||| ||||| | | ||||||||| ||| Sbjct 60 AGATTTTCATTCACAATACCATCAGATGCAGCAAAGAACGCTAGAATATGTTTTATGAAA 119 Query 33105 TATTTTTCGTCTGGTGTT--AGT--TTATTCCAATCATTGATATCTTTAGATATATCCAC 33160 || ||| || | | || | | || |||||||||| | ||| | | || | Sbjct 120 TAACGTTCATC-GCTATTCAACTTGTTGGTCCAATCATTAAGATCCGTGTGCAGGTCTAT 178 Query 33161 TTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATA 33220 |||||| | |||||||| ||||| ||||| ||| || ||| | ||||| | Sbjct 179 TTCTTCAGCAGTCCAAAAACTAGCCTCACATTTTTTGTACCAATCCCACAAATCATGGTG 238 Query 33221 TTGAATTGGAAAAATAACAAATC 33243 || || || ||||||||||||| Sbjct 239 TTTGATAGGGAAAATAACAAATC 261 >seq17866 Length=285 Score = 82.4 bits (90), Expect = 1e-10 Identities = 145/209 (69%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 62713 ATCAAA-TCGCCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGG 62771 |||||| ||||| ||| | | |||||| | ||||| || |||| |||||| || | Sbjct 27 ATCAAACTCGCCATTCT-TAATAAACATTGGAAGTGCAATGGAAGCCAAATTACATACTG 85 Query 62772 CTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGG 62831 | ||||||| | | ||||| | ||| || || ||||| || | || | Sbjct 86 CCACCTCATCCGGGGAAGTATATTCCAATATTTCCGTACAAAGGTTGGACGAGCGAATAG 145 Query 62832 TTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAG 62891 | |||||||| ||||| || |||||| | || |||||||||||||| || |||| | Sbjct 146 TACCTAAATTCTGTTGGTTGCTCTTTCTATTGGCGGCATCCTTATAAAGCATATATGGCG 205 Query 62892 TACCAGTTTCAATCTGAGATTCTATAATC 62920 ||||||| || || || || || | |||| Sbjct 206 TACCAGTCTCTATTTGTGACTCCAAAATC 234 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632767472499200