Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq34388 86.0 6e-12 >seq34388 Length=241 Score = 86.0 bits (94), Expect = 6e-12 Identities = 140/202 (69%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 20192 TAGATGTGGGCATCTCCCAACGTGTGAATAAACTCCCCGGGTCTAAGACCAGTAACATGA 20251 |||||||||||||| |||| |||||| || ||||| |||| | || || || ||||| Sbjct 202 TAGATGTGGGCATCACCCAGCGTGTGGATGAACTCGCCGGCCTTGAGGCCTGTGACATGG 143 Query 20252 GCAAGCATATAAGTTAAGAGGGAATAGCTGGCAATGTTAAAAGGAACTCCCAAACCCATG 20311 || | ||| | || | | | ||| || || || || ||||| |||| || Sbjct 142 GCCACCATGTGTGTCAGCAATGCGTAGGAAGCGATATTGAAGGGAACACCCAGGAAGATA 83 Query 20312 TCTCCCGACCTCTGATACAGCTGACAGGAAAGCTCACCGTCAGCTACATAAAATTGACAT 20371 ||| |||| | |||||||| ||| || || ||| |||||||| ||||| || || | Sbjct 82 TCTGCCGAGCGCTGATACAACTGGCACGACAGCCTGCCGTCAGCAACATAGAACTGGAAC 23 Query 20372 AACAAGTGACAGGGCGGAAGCG 20393 | | || || ||||| |||| Sbjct 22 AGGCAATGGCACGGCGGTAGCG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440770590951680