Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_010355.1 Length=62337 Score E Sequences producing significant alignments: (Bits) Value seq15943 91.5 6e-14 >seq15943 Length=290 Score = 91.5 bits (100), Expect = 6e-14 Identities = 113/153 (74%), Gaps = 4/153 (3%) Strand=Plus/Minus Query 6473 TCGAAAGAATAGAACGACTTGAGGAGGAAAAGA--GCGGTCTCCAGGAGGACATCAAGGA 6530 ||||| | || || || ||||| || ||||||| || || || | ||||||||||| Sbjct 253 TCGAACGCATCGAGCGGCTTGAAGAAGAAAAGAAGGCAATCGCC--GCTGACATCAAGGA 196 Query 6531 AGTCTACTCGGAAGCCAAGGGCACCGGGTTCGACGTCAAGATCATTCGGCAGATCATCCG 6590 |||||| ||||||||| || ||| |||||| ||||||||| ||| || || || | Sbjct 195 AGTCTATGGTGAAGCCAAGTCCAACGGTTTCGACACCAAGATCATGCGGAAGGTCGTCAG 136 Query 6591 CTTGCGGAAGATGGACAAGGCCGACCGGCAGGA 6623 | | || |||| ||||| || || || ||||| Sbjct 135 CCTTCGCAAGAAGGACAGCGCGGAGCGCCAGGA 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199088401899456