Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_010583.1 Length=111382 Score E Sequences producing significant alignments: (Bits) Value seq95498 134 1e-26 >seq95498 Length=505 Score = 134 bits (148), Expect = 1e-26 Identities = 309/463 (67%), Gaps = 2/463 (0%) Strand=Plus/Minus Query 51051 TATGCATACACGGACGTAGGCATCCTTTACGAAATTCCCCACGGGTTCCAAAAG-TTAAA 51109 |||||||||| || | || || || || |||||||||| ||| || |||| ||| Sbjct 505 TATGCATACAAGGCCTTAAACAGCCCATATGAAATTCCCC-CGGATTATAAAAACTTAGT 447 Query 51110 ATTTCTCCACGATCGTCAATCCCTCTTTTCAAATTATGATAGACTTTGGCTAACTGATCA 51169 |||||| ||||||| ||||| ||| | |||| |||| | ||| || || || Sbjct 446 ATTTCTGCACGATCATCAATGCCTTTACTCAAGTTATCTACTATTTTCTGCAATTGGTCT 387 Query 51170 AATACCATACCATCAGAATTAGTCCAATGACGTCCTTGAACACCATAGACTCGTCCCATA 51229 | | ||||||| |||| |||| ||| ||||||| |||||| || ||||||||| Sbjct 386 ATTGTGCCGCCATCAGGTTTAGCCCAAGCACGACCTTGAATACCATAAACCCGTCCCATA 327 Query 51230 TCATCCTCGCCTTTACGGAATGGATTACCTAGCCAGGCAATATTTTCATTTGCATTAGCA 51289 |||||||| ||||||||| | | |||| ||||| || |||| ||| ||||| ||| Sbjct 326 TCATCCTCACCTTTACGGTAAGCATTATTGAGCCATACATCATTTAAATTAGCATTCGCA 267 Query 51290 TTCCATGTATTAACACCAATAGCGCGGAATTGTGCTGCTGAGTCGTACCCACGGAGATAT 51349 | |||||| ||| || | || || | || || || || ||||||| |||| Sbjct 266 TCCCATGTTTTAGTGCCTAATTTACGAAAATCAGCAGCATTATCATAACCACGGATATAT 207 Query 51350 CCGATCATTTCCATTATTGCTTGTTTAGCAAATGCTTTACGAGTAGTTACTAGCGGCAGT 51409 || | | || || || |||| ||| |||||| || |||| | ||| | | Sbjct 206 CCCAAAAACTCAGCAATAGCAGATTTAAAAAAGCTTTTACGTGTCGTTATCATCGGGAAT 147 Query 51410 TCTCCTGCTCCTACGTTAAAGGTAAAGTCTGCATCAATAATGGTTAGGCAACGAACCCCT 51469 || | | |||||| | || ||||||| ||||| |||| || || ||| Sbjct 146 TCATTTTGGGCAACGTTATATTCTAAATCTGCATTAATAACCGTTAAACAGCGTTTACCT 87 Query 51470 GTTCTAGGATTCGTTACCCATACACCCTCTTCAAGAATACGTT 51512 || | |||| ||||| ||| | ||||| |||||||| Sbjct 86 GTGCGTTCATTCTCAACCCAAGTACCTTGTTCAACAATACGTT 44 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355823620865696