Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq108602 84.2 2e-11 >seq108602 Length=371 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | ||||| ||||||||||| || ||||| | || | | || ||| Sbjct 139 ACCAAATGGAGAGTAGATTCTTTTTGAATGTTATAATCTGATAGAGTTCTACCGTCTTCT 198 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 | ||||||||||| |||| | || ||| || || || || || ||||| || || Sbjct 199 AATTGTTTTCCAGCAAAGATAAGTCTCTGTTGGTCTGGTGGAATTCCCTCTTTATCTTGA 258 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 || || ||||| | |||| |||||| | || || || | ||| | ||||| Sbjct 259 ATCTTAGTCTTGACATTGTCGATGGTGTCAGATTGTTCAACATCTAAGGTGATGGTTTTT 318 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || ||||| || ||||| |||||||| Sbjct 319 CCAGTAAGAGTCTTAACAAAGATCTGCAT 347 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 474852026708480