Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_012696.1 Length=73325 Score E Sequences producing significant alignments: (Bits) Value seq84156 105 3e-18 >seq84156 Length=807 Score = 105 bits (116), Expect = 3e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 25072 CAAGTTCCTACGTGCTGGTAGGATCAACTCCGGTGCAGGAACAGGCCGGAATGTGACTCT 25131 ||||||||| | ||||| |||||| |||| || || || | || || || || || Sbjct 578 CAAGTTCCTGCCGGCTGGCCGGATCATTGCCGGCGCGGGCACCGAGCGCAAGGTTACGCT 637 Query 25132 CTTCAACTGCTACGTCATGGGAACTATCCCTGACAGCCTTGATGGTATCTTTGATATGCT 25191 |||||||||| ||||||||| | || | ||| | | | | ||||| ||| || Sbjct 638 GTTCAACTGCTTTGTCATGGGAGCCATTCAAGACGACATGGGCGCGATCTTCGATGGACT 697 Query 25192 CAAGGAAGCTGCACTCACCATGCAGCAAGGCGGTGGAATTGGTTATGACTTCTCTACCCT 25251 || || ||||| |||||||||||||||||||| || || |||||||||| || || Sbjct 698 GCGCGAGGCCGCACTGACCATGCAGCAAGGCGGTGGTATCGGCCATGACTTCTCCACGCT 757 Query 25252 TCGTCCCA 25259 ||| |||| Sbjct 758 TCGCCCCA 765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 234203226774592