Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_012697.1 Length=74611 Score E Sequences producing significant alignments: (Bits) Value seq84156 105 3e-18 >seq84156 Length=807 Score = 105 bits (116), Expect = 3e-18 Identities = 136/188 (72%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 26466 CAAGTTCCTACCTGCTGGTAGGATCAACTCCGGTGCTGGAACAGGCCGGAACGTGACTCT 26525 ||||||||| || ||||| |||||| |||| || || || | || || || || || Sbjct 578 CAAGTTCCTGCCGGCTGGCCGGATCATTGCCGGCGCGGGCACCGAGCGCAAGGTTACGCT 637 Query 26526 CTTCAACTGCTACGTCATGGGTACTATCCCTGACAGCCTTGATGGTATCTTCGATATGCT 26585 |||||||||| |||||||| | || | ||| | | | | ||||||||| || Sbjct 638 GTTCAACTGCTTTGTCATGGGAGCCATTCAAGACGACATGGGCGCGATCTTCGATGGACT 697 Query 26586 CAAGGAAGCTGCACTTACCATGCAGCAAGGTGGTGGAATCGGTTACGACTTCTCTACCCT 26645 || || ||||| |||||||||||||| ||||| ||||| | |||||||| || || Sbjct 698 GCGCGAGGCCGCACTGACCATGCAGCAAGGCGGTGGTATCGGCCATGACTTCTCCACGCT 757 Query 26646 TCGTCCCA 26653 ||| |||| Sbjct 758 TCGCCCCA 765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238312952365184