Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_014036.1 Length=174436 Score E Sequences producing significant alignments: (Bits) Value seq60379 93.3 5e-14 >seq60379 Length=4852 Score = 93.3 bits (102), Expect = 5e-14 Identities = 125/174 (72%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 40025 TGCCTGGAACCCTGTTGATCTTGATGATATGGCATTGCGTCCGTGTCACTGTTTCTTTCA 40084 ||| |||||||||| | | || || ||||| |||| || ||||| ||| | ||||| Sbjct 1670 TGCTTGGAACCCTGCTCTGGTAGACGAGATGGCTTTGCCGCCATGTCATTGTCTGTTTCA 1611 Query 40085 GTTCGTTGTAATCAACGGTAAACTGTCTCTACAGTGGTATCAGCGTTCAGTTGATGTCTT 40144 ||| ||| |||| || || || ||| ||||||||||| | ||| |||| Sbjct 1610 GTTTTATGTCGCGGACGGCAAGCTTTCATGCCAGCTCTATCAGCGTTCGGCGGATATCTT 1551 Query 40145 CTTAGGGTTGCCGTTCAATATCGCCTCCTATGCTCTCCTGACGCATATTATCGC 40198 ||||| |||| ||||||||||| |||||||| || || ||||| || || || Sbjct 1550 TTTAGGTGTGCCATTCAATATCGCGTCCTATGCGCTTCTTACGCACATGATTGC 1497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557305773112320