Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_014467.1 Length=176788 Score E Sequences producing significant alignments: (Bits) Value seq60379 84.2 2e-11 >seq60379 Length=4852 Score = 84.2 bits (92), Expect = 2e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 40071 GCCTGGAACCCTGTTGATCTTGATGATATGGCTTTGCGTCCGTGTCACTGTTTCTTCCAG 40130 || |||||||||| | | || || |||||||||| || ||||| ||| | || ||| Sbjct 1669 GCTTGGAACCCTGCTCTGGTAGACGAGATGGCTTTGCCGCCATGTCATTGTCTGTTTCAG 1610 Query 40131 TTCGTCGTAATCAACGGTAAACTGTCTCTACAGTGGTATCAGCGTTCAGTTGATGTCTTC 40190 || || |||| || || || ||| ||||||||||| | ||| |||| Sbjct 1609 TTTTATGTCGCGGACGGCAAGCTTTCATGCCAGCTCTATCAGCGTTCGGCGGATATCTTT 1550 Query 40191 TTAGGGTTGCCGTTCAATATCGCCTCCTACGCTCTCCTGACGCATATTATCGCTGATATT 40250 ||||| |||| ||||||||||| ||||| || || || ||||| || || || | | Sbjct 1549 TTAGGTGTGCCATTCAATATCGCGTCCTATGCGCTTCTTACGCACATGATTGCACAGGTG 1490 Query 40251 TGCGGGTATGAAGTGGGTGAT 40271 || | ||| ||||||||| Sbjct 1489 TGTGACCTTGAGGTGGGTGAT 1469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564821904092160