Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_014635.1 Length=163875 Score E Sequences producing significant alignments: (Bits) Value seq82597 86.0 7e-12 >seq82597 Length=872 Score = 86.0 bits (94), Expect = 7e-12 Identities = 78/96 (81%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 105511 AGGAGAAGTGGATGAGCGGCTGAAATCGCTTCCCTGCTAAGGAAGTAAAC--CGAAAG-G 105567 |||||| |||| ||||||||||| |||| ||||||||||| |||| || | |||| | Sbjct 220 AGGAGACGTGGCCGAGCGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATACGTCAAAAGCG 279 Query 105568 TTTCGAGAGTTCAAATCTCTCCTTCTCCGCCAAATG 105603 | ||||| |||| |||| |||| |||||||||| || Sbjct 280 TATCGAGGGTTCGAATCCCTCCGTCTCCGCCAACTG 315 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 523556683283200