Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_015250.1 Length=159801 Score E Sequences producing significant alignments: (Bits) Value seq59553 86.0 6e-12 >seq59553 Length=7800 Score = 86.0 bits (94), Expect = 6e-12 Identities = 70/84 (83%), Gaps = 1/84 (1%) Strand=Plus/Plus Query 69734 TTAATCTGGTGGGCCCAGCAGGACTCGAACCTGAAACCAACGGATTATGAGTCCGCTGCT 69793 |||| |||||||||| | ||||||||||| | ||||| ||||||||||||| ||||| Sbjct 3023 TTAAATTGGTGGGCCCGCCTGGACTCGAACCAGGGACCAATGGATTATGAGTCCACTGCT 3082 Query 69794 CT-GCCAATTGAGCTATAGGCCCT 69816 || |||| ||||||| ||||||| Sbjct 3083 CTAACCAACTGAGCTACAGGCCCT 3106 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510537670693120