Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_015274.1 Length=56506 Score E Sequences producing significant alignments: (Bits) Value seq67088 80.6 1e-10 >seq67088 Length=2127 Score = 80.6 bits (88), Expect = 1e-10 Identities = 64/77 (83%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 10503 AAAGTTTACATCATTGACGAGGTTCATATGCTTTCAACCGGAGCATTTAATGCGCTGTTG 10562 ||||| || |||||||| |||||||| ||||||||||| | |||||||||||| | || Sbjct 902 AAAGTATATATCATTGATGAGGTTCACATGCTTTCAACGAGTGCATTTAATGCGTTCCTG 843 Query 10563 AAAACATTAGAAGAGCC 10579 |||||| | ||||| || Sbjct 842 AAAACACTTGAAGAACC 826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 180463383384832