Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_015292.1 Length=84565 Score E Sequences producing significant alignments: (Bits) Value seq96190 84.2 1e-11 >seq96190 Length=494 Score = 84.2 bits (92), Expect = 1e-11 Identities = 67/80 (84%), Gaps = 2/80 (3%) Strand=Plus/Minus Query 22480 GCGGGATGGAGCAGT--GGTAGCTTGCCAGTTTCATTATCTGGAGGTCGTAGGTTCGAAT 22537 |||||||||||||| ||||||| | ||| |||| | ||| ||||||||||||| ||| Sbjct 296 GCGGGATGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCAAAT 237 Query 22538 CCTACTCCCGCTTCCAAATT 22557 ||||||||||| ||||||| Sbjct 236 CCTACTCCCGCAACCAAATT 217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 270123378903872