Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq59922 347 1e-90 seq75063 206 3e-48 seq64137 159 4e-34 seq14334 109 6e-19 seq18475 105 8e-18 seq3443 98.7 1e-15 >seq59922 Length=6033 Score = 347 bits (384), Expect = 1e-90 Identities = 631/917 (69%), Gaps = 30/917 (3%) Strand=Plus/Minus Query 18655 TTCATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCC 18714 |||| ||||| |||||| ||||| ||||||| ||||||||||| || ||||| || Sbjct 1162 TTCAAAACTCCAGCTTTTTGGTATTCACCAACTCTCTTTTCAAAGAAGTTCGTTTTCCCT 1103 Query 18715 TCTAATGATATACATTCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAAT 18774 | | ||| || |||||| ||||||||||| ||| | | || ||| ||||| | | Sbjct 1102 TGAATTGAAATCATTTCCATGAAATCAAATGGGTTTGTCGCGTTGAATACTTTTTCGTTT 1043 Query 18775 CCTAATTCTAATAGTAGTCTATCCGCTACAAATTTAATATATGTGTTCATCATATCACAA 18834 |||||||| || | || |||||| || ||||| | ||| ||| ||||| ||||| Sbjct 1042 CCTAATTCCAACAATAATCTATCAGCAACAAACTCAATGTATTGCGACATCAAATCACTG 983 Query 18835 TTCATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACT 18894 |||||||| ||||| ||||| || ||||| || || |||||||| || || | ||| Sbjct 982 TTCATTCCGATTAACTTAACGGGAAGTGCTTCAAGAATAAATTCTTTCTCAATTTCAACT 923 Query 18895 GCCTCTGATATAATAGATACAACTCTATCTTCATTAGGAGGGTATAGAAGATGTT----- 18949 || || ||||| |||| | || | || | || ||| | ||||| Sbjct 922 GCGTCAAGGATAATTTTCTGAACTGTTTCCT--TTGGAAGTTTATCAACGATGTGGTTGG 865 Query 18950 TAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAG 19009 | | | |||||||| |||||||| || | ||| |||||||| || || || |||| Sbjct 864 TGTATAATAAACATGCGAAATCACAGTGCAATCCTTCGTCTCTTGAGATTAACTCGTTAG 805 Query 19010 AAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATC 19069 | || | | || ||||||||||||||||| || |||||| | || ||| || || | Sbjct 804 AGAAAGAAAGCCCTGGCATCAGTCCTCTTTTCTTCAACCAGTAAATTGAACAGAAAGAAC 745 Query 19070 CAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCAT 19129 | || ||||| || ||||| ||||||||||| ||||| ||||||||| || || | | | Sbjct 744 CTGAGAAGAAAATTCCTTCCACTGCTGCAAATGCAACAAGTCTTTCTGCA-AATGATCCT 686 Query 19130 CATTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCT 19189 | || |||||| || |||||||| || || || |||||| |||||| | Sbjct 685 -----TCATCAATCCAACGCAAAGCCCAATCTGCTTTTACCTTAACACATTCCATTGTGT 631 Query 19190 CTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATCAATA 19249 | |||| |||||| | ||| || | || ||||||| || | |||||| || | Sbjct 630 CAATAGCATTAAACAAATATTCTTTGTCCTTCGTGTCTTTAATGTAAGTATCTATTAAAA 571 Query 19250 AACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTG 19309 ||| |||| || ||||| ||||| | || | || || ||||| ||| || ||| Sbjct 570 GCGAATACGTTTCAGAGTGAATGTTTTCAACTGCTACTTGGAACCCGTAGAAAAATTTTG 511 Query 19310 CTTCTGTTATCTGTACTTC--ACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCC 19367 | || || ||| ||||| || | ||| || || | || |||||||| || ||||| Sbjct 510 CCTCAGTATACTGAACTTCTGACAAGAAATTC--TCTGCTAAGTTTTCATTTACAATTCC 453 Query 19368 ATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAA 19427 ||| || || ||||| || ||||||||||||| |||||| ||||| | ||| | Sbjct 452 ATCTGATGCCGCGAAAAAAGCCAATACATGTTTAACAAAATGACGTTCAT-TATCGTTCA 394 Query 19428 ----TGTATTCCAATCATTAATATC----TTTAGATAAATCTACTTCTTCAACTGTCCAA 19479 |||| ||||||| | | || | |||| |||| ||||| ||||||| Sbjct 393 GCTTCGTATCCCAATCAATTAAGTCGGCTTGAAGATCAATC----TCTTCGGCTGTCCAG 338 Query 19480 AAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATA 19539 ||| ||| || || ||||| || | ||| || ||| | ||| || ||||||| | Sbjct 337 AAACTAGCTTCGGCCTTTTTGTAGAAAGCCCAAATGTCATCGTGTTGAATTGGAAATAGA 278 Query 19540 ACAAATCTATTTTTATT 19556 |||||||| || || || Sbjct 277 ACAAATCTGTTGTTGTT 261 Score = 306 bits (338), Expect = 4e-78 Identities = 1205/1884 (64%), Gaps = 38/1884 (2%) Strand=Plus/Minus Query 46973 TTTTTCCACAGTAAACTTAATTGGATTACTCGCTGATTTTGTTCGTAAATAATACATACC 47032 ||| || || ||||||||||||| || | |||| ||| ||||| || |||||||| || Sbjct 3513 TTTGTCAACTGTAAACTTAATTGCATCCGTTGCTGCTTTCGTTCGCAAGTAATACATTCC 3454 Query 47033 AGTCTTTAAACCTAAACTCCATCCATAGAAATGCATACTAGTTAATTTAGAATAACTAGG 47092 || || || ||| |||||| ||||| |||||| || | ||| | | | Sbjct 3453 CGTTTTCAATCCTTTTTCCCATCCGTAGAAGTGCATAGACGTCAGTTTCCCGAAGTTTGC 3394 Query 47093 TTCTGAAATATGAATATTAAGAGATTGACTCTGATCAATAAATGCACCTCTATCAGCTGC 47152 | | || |||||| | |||||| ||| ||| | || |||||||| || || Sbjct 3393 ATTTTCCATGAAAATATTCAATGATTGAGATTGACAAATGTAAGCCCCTCTATCCGCAGC 3334 Query 47153 CATATCTAAAATAACCCTTTGTGGTATCTCCCATACTGTTTTATAAATTTGTTTAATGTC 47212 ||| | ||| | |||| | ||||||||| ||||||| |||| | ||||| ||| Sbjct 3333 TTGATCGATAATCGCTTTTTGCGAAATCTCCCATGCTGTTTTGTAAAGATCTTTAA-GTC 3275 Query 47213 -TTCTGGGAGATTAG---TATTTTGAATAGATCC-TCCgttttctataattttgtttttt 47267 || ||| | ||| | ||||| |||||||| | | | || ||||| | Sbjct 3274 GTTGTGGAACGTTATCTATGTTTTGGATAGATCCGTTAGCTGTC-ATAATCATACGACGC 3216 Query 47268 aattcatttgaccaaagtt-ttcgttcagttaatgtttttaaAAGATGAGGATTAACAAT 47326 | ||| || ||| | | ||| || | | || ||| | ||| || ||||| || Sbjct 3215 ATTTCTTTGTTCCACAATCCTTCTTTAACTAGATCTTTCAATAAG-TGCTTGTTAACGAT 3157 Query 47327 TTGAAATTCTCCAGATAGTACTCTACGGCTATATATATTACTTGTATATGGTTCTATAGA 47386 || || || || | || | | |||| || || ||||||||||| | | | Sbjct 3156 GATGAACTCACCTGACAACACACGTCTTGTATAGATGTTTGAAGTATATGGTTCGAAACA 3097 Query 47387 TTCATTATTTCCAAAAATTTGAGCAGTTGATGCTGTAGGCATGGATGCAACTAATAAGCT 47446 ||| || ||||||| |||||||| ||||| ||||| ||||| | ||| | ||| || Sbjct 3096 TTCGTTGTTTCCAAGGATTTGAGCTGTTGAAGCTGTTGGCATTGGTGCCAATAACAATGA 3037 Query 47447 ATTTCTTACTCCATATTTTTGTATCTNNNNNNNNNNNNGTTTCCAATCCCAAAGATCTGA 47506 || | || || | | | | | ||| ||||| || Sbjct 3036 GTTACGCACACCGTGCTCCATCACTTCTGCTTTCAATACGTCCCATTCCCATCTGCTTGT 2977 Query 47507 TGGAACAACATTCCAAAAATCATATTGAAGAATT--CCTTTACTTATCGGAGAACCATTA 47564 |||| ||||||||| | ||| |||| ||||| ||||| | || || || | | Sbjct 2976 TGGAGTAACATTCCACATATCGAATTG--GAATTGACCTTTTGAAACTGGCGATCCTTCA 2919 Query 47565 TATGTTTTATAAGGACCGTATAGTTTAGCGAGTTCACAACTTGCTTCCAATGCACTATAA 47624 || | || || || || | | |||||| | || | ||| || || | ||| Sbjct 2918 TAAGATTGGTATGGTCCATCAACTTTAGCTAAATCTTTAGATGCAGTCATTGAAGCGTAA 2859 Query 47625 TATATTGTTTCAAATATTTTTATGTTTAGATTC-CTTGCTTCTGATGATTCAAAAGGATA 47683 || ||||||||||| | || | |||| | || | ||||||||| ||||||||| || | Sbjct 2858 TACATTGTTTCAAAAACTTCTCTGTTCA-ATGCTCTTGCTTCTTCTGATTCAAATGGCAA 2800 Query 47684 NNNNNNNNNNNNNAATGTATCTGCCAATCCTTGAACACCAATACCAATTGGTCTATGAGT 47743 || | |||||| || ||||||||||| | |||||||| | ||| Sbjct 2799 TCCCATTAAGATGAAAGCATCTGCTAACCCTTGAACACCTAATCCAATTGGACGGTGACG 2740 Query 47744 TTTATTAGAAAACTCAGCTTCTGGTAATGGATATTTGTTTATATCTATAATTTTATTTAG 47803 | ||||| | ||||||| | ||| || ||| ||| || |||||||| | Sbjct 2739 CATGTTAGAGTTTTTAGCTTCTTCAACTGGGTAGAAGTTACCATCAATGATTTTATTCA- 2681 Query 47804 ANNNNNNNNNNNNNNNNNNACAATTTCTCTTA--ATTTATTAAAATCAAACTTGTTATTT 47861 || | ||| | |||| | ||| || || || Sbjct 2680 -AGTTCAATGTCGCTTGGTACGTTACCTCGAACAATTTGTCGTGATCGAATTTCCC-TTC 2623 Query 47862 ATAACAAACCTATTAAG----TGCTATAGATGCTAGATTACATACAGCTACCTCATTTGG 47917 || | ||| |||| || ||||| ||| || | ||||| || || ||||||| ||| Sbjct 2622 ATCAGTAACATATTTAGGCAATGCTAAAGAAGCCAAGTTACAAACTGCAACCTCATCTGG 2563 Query 47918 ATTAGTATATTGTATTATTTCAGCACATAGATTACCACATTTGATAGTACCCAAATTTTG 47977 ||| || | ||| || |||| ||||| || | | || || ||||| || ||||| Sbjct 2562 CGCAGTGTACTCTATAATCTCAGTACATAAGTTTGAAGACTTAATTGTACCTAAGTTTTG 2503 Query 47978 ATGATT--ATTNNNNTTGTTACATGCGTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCT 48035 || || ||| | || || || || ||||| | ||| |||| || || || || Sbjct 2502 TTGGTTTGATTTTGAGT-TTGCA-GCATCTTTGTACAACATGTAAGGAGTACCTGTCTCA 2445 Query 48036 ATCTGAGATTCAATGATAGATTT---CCAAACAGTCCTAGCCTTT-ATAACAGCTCTAGC 48091 || |||||||| | ||| ||| ||||| ||| | |||| || ||| | Sbjct 2444 ATTTGAGATTCTAAGAT---TTTGAACCAAAG-GTCTTGTGCTTTGATTGTTTTTCTTCC 2389 Query 48092 TTTATTATCATGTTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATC 48151 ||| | | |||||| || || || ||| || |||||| | | | ||||| Sbjct 2388 TTTCCCTGCTTTTTCGTACTTCGTGTACAACGCTTCGAATTCAGCACTGTGCACATCTGA 2329 Query 48152 TAACCCAGGACATTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGT 48211 | || || ||||| | |||||||| || | ||| || ||| | ||| || | Sbjct 2328 AAGACCTGGGCATTCGTGCGGACACATTAAAGTCCACTCTCCATTTTCTTTCACACGTTG 2269 Query 48212 CATAAATATATCTGGTATCCAAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATT 48271 ||| |||| |||||| | ||| | ||| ||||||||| || | |||| | ||||| || Sbjct 2268 CATGAATAAATCTGGAACCCACAAAGCGTAAAATAAATCTCTTGCTCTTTGCTCTTCTTT 2209 Query 48272 GCCACTATTCCTTTT-AAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAAT 48330 || ||| | || |||| ||||| ||| | || |||||||||||| || || || | Sbjct 2208 ACCGTGATTTTTCTTCAAGTCTAAGAA-GTCAAATACATCAGCATGCCAAGGCTCCAAGT 2150 Query 48331 ATATTGCCATTACACCTGGTCGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGT 48390 | ||||| | |||| ||||| || |||||||||| ||||| ||||||| || Sbjct 2149 ACATTGCGAAAGAACCTTTACGTTTTCCTCCACCTTGATCTACGTATCTAGCAGTATCGT 2090 Query 48391 TATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTGGTTCCCGAAATATAAC 48450 || | |||||||||||||| || ||||| || || ||| || ||||| || || Sbjct 2089 TAAATACTCTTAACATTGGAACGATACCGTTAGAAGCACCGTTTGTTCCTTTGATGTATG 2030 Query 48451 TTCCACTAGCTCTTATATTACTAATTGAAATACCTATACCACCTGCCATTTTAGATATTA 48510 || | || | || || || | | || || ||||| || || ||| || Sbjct 2029 AACCTGTCGCACGGATGTTGTGCATAGCCAATCCAATTCCACCAGCTGATTGAGAGATCT 1970 Query 48511 GAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTATCATCTATCATATTTAATA 48570 ||||||| |||| | || |||||||||||||| |||||||| || |||| |||| | Sbjct 1969 GAGCACATTGTTTTAATGTGTCATAAATTCCTTCAATACTATCTTCCTTCATTGTTAAAA 1910 Query 48571 GAAAACAACTAGACATTTGCGGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCAT 48630 | |||||| |||||||| || | ||||| || ||||| || ||||| | ||| | Sbjct 1909 GGAAACAAGATGACATTTGTGGTTTTGGCGTTCCAGAGTTAAACAACGTTGGTGTTGCGT 1850 Query 48631 GAATAAACCATTTCTCTGATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATT 48690 | | |||||| ||||| | || || ||||| | ||| |||| || ||||| || Sbjct 1849 GTGTGAACCATCCTTCTGACATTAAGTTGTATGTCTTAATTGCAGAGTCGATATCTTTTT 1790 Query 48691 GATGTATACCTATAGATACACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTAT 48750 || || || | ||| |||||||| ||||| | ||| || | ||| |||| | | Sbjct 1789 TGTGAATTCCAACAGAAACACGCATCAACATTTGTTGTGGGCGTTCTGCAATCATTCCGT 1730 Query 48751 TTATTTTCAAAAGATATGATTTTTCCAATGTTTTAAAACCAAAATAGTTGTATGAAAAGT 48810 | | ||||| || || || ||| ||||||||||||||||||| |||| ||| | Sbjct 1729 TCAATTTCATTAGGTACGAGCGCGTCAACGTTTTAAAACCAAAATAGTCGTATCTAAAAT 1670 Query 48811 CGTTATCATTAATAATTGATGAAT 48834 | |||| | ||| || ||||| Sbjct 1669 CTCTATCGTAAATGATGCTTGAAT 1646 >seq75063 Length=1318 Score = 206 bits (228), Expect = 3e-48 Identities = 589/889 (66%), Gaps = 20/889 (2%) Strand=Plus/Plus Query 18669 TTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTTTCCCTCTAATGATATACA 18728 ||||||||| || ||| || |||| ||||||||||||||||| | | ||| || || Sbjct 113 TTTTTGATACTCACTTACTTTTCTTTCGAAGAAATTAGTTTTTCCTTGAAGTGAAAT-CA 171 Query 18729 T-TCCATAAAATCAAATGGATTTTTTACATTATATAtttttttGAATCCTAATTCTAATA 18787 | ||||| | || |||||||| | |||| | ||| | ||| | || | Sbjct 172 TGTCCATCCATTCGAATGGATTAACTGCATTGAAGTGCTTTGGTACTCCAAGAGTAAAGA 231 Query 18788 GTAGTCTATCCGCTACAAATTTAATATATGTGTTC-ATCATATCACAATTCATTCCTATT 18846 | |||||||| || ||||| | ||||||| ||| | || | | | |||||| || || Sbjct 232 GAAGTCTATCAGCAACAAACTCAATATAT-TGTCCCATAAGTTTGCTATTCATACCAATA 290 Query 18847 AATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATATTTACTGCCTCTGATATA 18906 | || || || | | || | | |||||| | || || |||||| || | | | Sbjct 291 AGTTCTACGGGCAAAGATTCAGATACAAATTCAAGCTCAATTGCTACTGCTTCAGTCAAA 350 Query 18907 ATAG-ATACAACTCTATCTTCATTAGG-AGGGTATAGA--AGATGTTTAAACATCAAACA 18962 || ||| || ||| |||||| | | ||| | | ||||||| ||| |||||| Sbjct 351 ATTTCATA-AATTCT---TTCATTTGATACCTTATTAACCATATGTTTATACAACAAACA 406 Query 18963 TGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACC 19022 ||||| ||| ||||| |||||| ||||| ||||| |||||||| || | || Sbjct 407 AGCAAAGTCAGTATGTAATCCCTCATCTCTTGAGATCAACTCATTAGAGAAACAAAGGCC 466 Query 19023 AGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATAT 19082 ||||| || ||| ||||| |||||||| || | ||| || ||||| ||||| || Sbjct 467 TGGCATAAGAGATCTCTTTTTCAACCAGAAAATTGCGCAAAAAGACCCAGAGAAGAAAAT 526 Query 19083 ACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAAT 19142 |||||||| ||||| |||| | |||||| || || || ||||| |||| ||| Sbjct 527 TCCTTCTACACAAGCAAACGCAATCAATCTTTCAGCA-AATGAG--TCATTCTTATTAAT 583 Query 19143 CCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAA 19202 |||||| | ||||| ||||||||||| || ||| | || | || |||| ||||| Sbjct 584 CCATTTAAAAGCCCAGTCAGCCTTCTTCTTAACAGTTTCAATATTATCAATAGCCTTAAA 643 Query 19203 TAGATACATACGCTCATCTG-TATCTTTAACATATGCATCTATCAATAAACTGTACATTT 19261 || | || | | || ||| ||| ||| | ||| || | | | ||| ||| Sbjct 644 AAG-GAAATCTTTTTCTTTGAGATCACTAATATAAGTATCAATAAGGAGAGAGTAAGTTT 702 Query 19262 CTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCT 19321 | |||| ||| || || | || || || || || ||||| |||| | || | Sbjct 703 CACTGTGAACATTCTCCATCATACTTTGGAAGCCATAGAAGCATCTAACTTCAGGGATTT 762 Query 19322 GTACTTCACTACAAAATCTTTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAA 19381 |||||||| | || | ||| | | ||| ||| || ||||||||| ||| || | Sbjct 763 GTACTTCAGCAGCGAAGCATTCAATAAGATTCTCAAGGACAATTCCATCAGAAGCAGCGA 822 Query 19382 AAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAATGT---ATTCCAAT 19438 | || || | || | ||| || || ||| | ||||| ||||| | |||||||| Sbjct 823 AGAAAGCAAGCACGTATTTGATGAAGTGTCTCTCATCATCATTTAATTTATCATTCCAAT 882 Query 19439 CATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTT 19498 | || | |||| || ||||||| |||||| || |||||| | || | | |||| Sbjct 883 CTTTTAAATCTGAAGCCAAATCTATCTCTTCAGCTACCCAAAAGCATGCTTGTTGCTTTT 942 Query 19499 TATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAAATCT 19547 | ||||| | ||| | || | ||||| || || || | ||| ||||| Sbjct 943 TGTACATTTCCCAAACGTCGTGGTATTGGATTGGGAAAAGAACGAATCT 991 >seq64137 Length=2701 Score = 159 bits (176), Expect = 4e-34 Identities = 599/925 (65%), Gaps = 28/925 (3%) Strand=Plus/Minus Query 47883 ATAGATGCTAGATTACATACAGCTACCTCATTTGGATTAGTATATTGTATTATTTCAGCA 47942 || || || || |||||||||||||| | || | || ||| || | || || ||| Sbjct 1509 ATTGAGGCGAGGTTACATACAGCTACTTGATCTTTATCAGTGTACTCCATGATCTCACAG 1450 Query 47943 CATAGATTACCACATTTGATAGTACCCAAATTTTGATGATTATTNNNNTTGTTA-CATGC 48001 || || || || |||||||| || | ||| || || ||| ||| |||| Sbjct 1449 CAGAGGTTTGAACTCTTGATAGTTCCAAGATTCTGCTGGTTAGATTTTCCATTAGCATGA 1390 Query 48002 GTCCTTGTAAAGCATAAAAGGTGTTCCAGTTTCTATCTGAGATTCAATGATAGATTTCCA 48061 ||||| || ||||| | || |||||| |||||||| || |||| ||| | ||||| Sbjct 1389 -TCCTTATACAGCATGTATGGGACTCCAGTCTCTATCTGTGACTCAAGGATGGCATTCCA 1331 Query 48062 AACA-GTCCTAGCCTTTATAACAGCTCTAGCTTTATTATCAT---GT-TCGTATTTAGTA 48116 | | || | ||||| | ||| ||| ||| || || | || || ||||| | Sbjct 1330 TAGATGTTGT-GCCTTGA---CAG-TCTTTCTTCCTTTTCCTTCAGTCTCATATTTCTCA 1276 Query 48117 TATAACTTCTCAAATTCAT--CCCCATACACATTATCTAACCCA---GGACATTCATTAG 48171 || | | |||||||| | ||||| | | || ||| || |||||||| | Sbjct 1275 TAGAGTTCTTCAAATTCTTTTCCCCA-----AGTTTCGAACAATTGGGGGCATTCATTTG 1221 Query 48172 GACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATCTGGTATCC 48231 |||| | | || ||| || |||||| || |||||| |||| |||||||| | || Sbjct 1220 GACAGAAGAGTGTCCAGTCTTCATCAGCTTCTACTCTCCTCATGAATATATCACTAACCC 1161 Query 48232 AAAGAGCTATAAATAAATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCCTTTT-AAGT 48290 | | ||| || | || || | ||| |||| || || ||| ||| | | |||| Sbjct 1160 ACAAAGCGTAGAAGAGGTCTCTTGCTCTCTGTTCATCTTTACCATGGTTCTTCCTCAAGT 1101 Query 48291 TCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGCCATTACACCTGGT 48350 | ||| ||||| ||||| | |||||||||||| | || || || | | || | Sbjct 1100 T-AAGGAAGTCATAAATATCTGGATGCCATGGTTCGAGGTAGATAGCGAAAGCTCCCTTT 1042 Query 48351 CGTTTATTACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGG 48410 | ||| |||||||| || | |||||| ||||| | || | || || | ||||||| Sbjct 1041 CTCTTACCGCCTCCTTGGTCAACATATCTTGCAGTGTCATTGAAGACCCTAAGCATTGGG 982 Query 48411 ACAATACCATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTA 48470 |||| |||||||| ||| || ||||| || || | | | ||| ||| Sbjct 981 ACAAGTCCATTTGAGTGACCGTTTGTTCCTCTGATGTAGGAAGAAGTTGATCTAATACAG 922 Query 48471 CTAATTGAAATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTA 48530 || | | || || || || || | ||||| || | |||||| ||| | || Sbjct 921 TGAACAGCCAATCCAATTCCTCCAGCATTCTTAGAGATAATAGCACATTGTTGTAATGTT 862 Query 48531 TCATAAATTCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGC 48590 || |||||||||| || |||||| ||| ||||| ||| || | |||||| Sbjct 861 TCGAAAATTCCTTCAATTGAATCATCCCGCATTGCTAATAAAAAGCATGAACTCATTTGT 802 Query 48591 GGATGACAAGTTCCTGAATTAAATAATGTTGGAGATGCATGAATAAACCATTTCT--CTG 48648 || | || || | |||||| | ||||| | || || | |||||||||| || Sbjct 801 GGTTTTGGGGTACCAGCATTAAAGAGGGTTGGTGTGGCGTGTGTGAACCATTTCTGACTC 742 Query 48649 ATAACAATTTATATGTTTCAATAACAGAATCTATATCCCATTGATGTATACCTATAGATA 48708 || | | | |||||| |||| |||| |||| || | ||| ||||| ||||| | Sbjct 741 ATGAGA--TCATATGTCTCAAATGCAGATTCTAAGTCATTCTTATGAATACCAATAGAGA 684 Query 48709 CACGCATTAACATATATTGAGGTCTTTCAACAATTTTGTTATTTATTTTCAAAAGATATG 48768 | | ||| | ||| || ||||| ||||||||||| | |||| ||| | | ||||| Sbjct 683 CTCTCATAAGCATTGTCTGTGGTCTCTCAACAATTTTATCGTTTACTTTTAGTAAATATG 624 Query 48769 ATTTTTCCAATGTTTTAAAACCAAA 48793 || |||| | || || || ||||| Sbjct 623 ATCTTTCAAGAGTCTTGAACCCAAA 599 >seq14334 Length=297 Score = 109 bits (120), Expect = 6e-19 Identities = 204/294 (69%), Gaps = 7/294 (2%) Strand=Plus/Plus Query 19289 GAAATCCGTAAAAACATCTTGCTTCTGT-TATCTGTACTTCACT-ACAAAATCTTTCGAC 19346 |||| ||||| || | |||| || | ||| || |||||||| || |||| |||| | Sbjct 1 GAAAACCGTAGAAGAACTTTGCCTCGGCATAT-TGAACTTCACTTACGAAAT-TTTCAGC 58 Query 19347 CAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAA 19406 | ||||||||| || || |||||| || ||||| || |||| | |||||| || || Sbjct 59 TAGATTTTCATTCACAATACCATCAGATGCAGCAAAGAACGCTAGAATATGTTTTATGAA 118 Query 19407 ATGTTTTTCATCTGAGGTTAATGTATT---CCAATCATTAATATCTTTAGATAAATCTAC 19463 || |||||| | || | || ||||||||||| ||| | | |||| Sbjct 119 ATAACGTTCATCGCTATTCAACTTGTTGGTCCAATCATTAAGATCCGTGTGCAGGTCTAT 178 Query 19464 TTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATA 19523 ||||||| | ||||||||| |||||| |||||| ||| | ||| | |||| | | Sbjct 179 TTCTTCAGCAGTCCAAAAACTAGCCTCACATTTTTTGTACCAATCCCACAAATCATGGTG 238 Query 19524 TTGTATAGGAAATATAACAAATCTATTTTTATTTTCTTTAAGAATAGGTTCCAT 19577 || ||||| || |||||||||| || |||||||| ||||| || || || Sbjct 239 TTTGATAGGGAAAATAACAAATCGGTTAAGGTTTTCTTTCAGAATCGGCTCTAT 292 >seq18475 Length=282 Score = 105 bits (116), Expect = 8e-18 Identities = 166/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 48104 TTCGTATTTAGTATATAACTTCTCAAATTCATCCCCATACACATTATCTAACCCAGGACA 48163 ||||||||| ||||| |||||||||||||| || | | ||| | ||||||||| Sbjct 33 TTCGTATTTGGTATACAACTTCTCAAATTCTTCACTGTGATGGTTAAAGAGCCCAGGACA 92 Query 48164 TTCATTAGGACACATCAATGACCAATCCTCATCATTTTTTACTCTAGTCATAAATATATC 48223 ||||||||| ||||| | | ||| | |||| | ||| || |||| |||| ||| Sbjct 93 TTCATTAGGGCACATTAGGGTCCAGTTTTCATTGGCCTCTACCCTTTTCATGAATAAATC 152 Query 48224 TGGTATCCAAAGAGCTATAAATAA-ATCCCTAGTTCTTAGTTCTTCATTGCCACTATTCC 48282 || ||||| | ||| ||||| || || || | || | |||||| || || ||| Sbjct 153 CGGAATCCACATAGC-ATAAAAAAGGTCTCTGGCCCTCATTTCTTCCTTACCGTGATTTT 211 Query 48283 TTTTAAGTTCAAGAAAGTCCATTATATCAGCATGCCATGGTTCTAAATATATTGC 48337 |||| || || ||||| || ||| || ||||||||||| || | ||| || || Sbjct 212 TTTTCAGATCCAGAAAATCATATATGTCCGCATGCCATGGCTCCACATAGATAGC 266 >seq3443 Length=346 Score = 98.7 bits (108), Expect = 1e-15 Identities = 180/264 (68%), Gaps = 0/264 (0%) Strand=Plus/Minus Query 48359 ACCTCCTTGATCTATATATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACC 48418 ||| || ||||||| || | ||||||| |||| |||| | ||| || |||||||| Sbjct 316 ACCGCCCTGATCTACGTAACGCGCAGTATCGTTAAAAACCTGCAGCATGGGCACAATACC 257 Query 48419 ATTTGATATACCATTGGTTCCCGAAATATAACTTCCACTAGCTCTTATATTACTAATTGA 48478 ||| || | |||||||| || | |||||| || | || | || ||| || || Sbjct 256 ATTGGAAGTCCCATTGGTACCTGCGATATAAGAACCTGTGGCCCGTACATTGTGTATGGA 197 Query 48479 AATACCTATACCACCTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAAT 48538 || |||||| || || || || || ||| || |||| || ||||||||||| Sbjct 196 AAGACCTATCCCGCCAGCAGATTGTGAAATTTTTGCCGTTTGTTTTAGCGTATCATAAAT 137 Query 48539 TCCTTCTATACTATCATCTATCATATTTAATAGAAAACAACTAGACATTTGCGGATGACA 48598 || || |||||||| || |||| || || |||||| |||||||| || | | Sbjct 136 ACCATCAATACTATCGTCCTTCATTGCCAAAAGGAAACAAGAGGACATTTGAGGTTTAGG 77 Query 48599 AGTTCCTGAATTAAATAATGTTGG 48622 || || |||||||| || || || Sbjct 76 GGTACCCGAATTAAACAAGGTAGG 53 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 561341858753280