Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq64823 174 1e-37 seq74710 163 2e-34 seq61502 145 6e-29 seq87644 138 9e-27 seq65898 131 1e-24 seq108602 114 1e-19 seq65658 114 1e-19 seq59389 114 1e-19 seq62037 111 1e-18 seq105287 109 4e-18 seq41074 104 2e-16 seq19544 102 7e-16 seq60879 100 2e-15 seq70148 96.9 3e-14 seq59903 95.1 1e-13 seq14831 95.1 1e-13 seq44811 89.7 4e-12 seq94139 87.8 1e-11 seq88500 87.8 1e-11 seq80117 87.8 1e-11 seq73282 87.8 1e-11 seq90046 86.0 5e-11 seq60106 86.0 5e-11 seq901 86.0 5e-11 >seq64823 Length=2513 Score = 174 bits (192), Expect = 1e-37 Identities = 399/593 (67%), Gaps = 17/593 (3%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 ||| || || || ||||| |||||||| || || || || || ||| || | ||| Sbjct 2088 AGCCATTGGAATCGATTTGGGAACCACCTACTCATGCGTAGGAGTATGGGTCAACGATAA 2029 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||||||||| || || || ||||||||| |||||| ||||| || || || ||||| Sbjct 2028 AGTTGAAATCATCGCTAACGATCAAGGTCTCAGAACCACTCCTTCATACGTCGGATTCAC 1969 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || ||||| | |||| ||| | || ||| |||| | | | || || || || Sbjct 1968 CGACTCTGAAAGACTCATTGGAGATTCTGCCAAAAATCAGACTGCCAGAAACCCAACAAA 1909 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 ||| | |||||||| || | | ||||| || | | || || | ||||| || | Sbjct 1908 CACTGTCTTTGATGCCAAGAGACTTATTGGTAGGAAGTACAACGACCCAACTGTCCAAGA 1849 Query 550231 AGATATGAAGCATTGGCCTTTCCAAATTGTTAA------TGTTTCTGGAAAACCTTATAT 550284 ||||| |||| |||||||||| | ||||| |||| || || || || Sbjct 1848 TGATATCAAGCTTTGGCCTTTC---ACCGTTAAGCCAGGTGTTGATGATAAGCCACTCAT 1792 Query 550285 TGAAG--CTACTCATGAAGGATCTGTTAAACAATTTTC-ACCAGAACAAATTTCATCTAT 550341 ||||| | | ||| | ||| |||| | ||| | |||||| || || ||||| || Sbjct 1791 TGAAGTTCAATTCA--AGGGAGAAACTAAA-ACTTTCCAACCAGAGCAGATCTCATCAAT 1735 Query 550342 GGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGC 550401 ||| || | || ||||| || ||| ||| | ||| |||| ||| || || Sbjct 1734 GGTCTTGACCAAGATGAAGGAAGTAGCTGACTCTTACCTCGGTAAAGATATTAAAGACGC 1675 Query 550402 AGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGG 550461 || || || || ||||| ||||| || || || || | ||||| || |||||||| || Sbjct 1674 TGTTATCACCGTCCCAGCTTATTTCAACGATTCTCAGAGACAAGCCACCAAAGATGCCGG 1615 Query 550462 ACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGC 550521 | |||||| ||| | || ||||| | ||||| |||||||| || || || || |||| Sbjct 1614 AGTTATTGCCGGATTAAACGTTCTCAGAATTATTAATGAACCAACAGCAGCCGCTATTGC 1555 Query 550522 ATATGGACTTGATAAACA-TAATGATCAAGAACTTAATGTACTCATCTTTGAT 550573 |||||||| || ||| | | | | | ||| || ||||||||||| ||| Sbjct 1554 TTATGGACTCGACAAAAAGTCCTCAGC-TGAAAGAAACGTACTCATCTTCGAT 1503 >seq74710 Length=1354 Score = 163 bits (180), Expect = 2e-34 Identities = 412/615 (67%), Gaps = 25/615 (4%) Strand=Plus/Minus Query 1046945 ATGGTTTTGAACCAAGTGGAAGAATACATATTGCACAAGCACTTATTACAGT-AATGAAC 1047003 |||| |||||||| |||||||| |||||||| |||| |||| ||| ||| ||| || Sbjct 1003 ATGGGTTTGAACCTTCAGGAAGAATGCATATTGCCCAAGGACTT-TTAAAGTCAATCAAT 945 Query 1047004 ACTAATACCATTATTCAAAATGGAGGA-TCAATGATTATATATATTGCTGATTGGTTTGC 1047062 |||| || | |||| |||||| || || | | | | || || ||||| || Sbjct 944 GTAAATAAGATCACTCAATCAGGAGGAATCTTTGTCTTT-TGGGTAGCAGACTGGTTCGC 886 Query 1047063 ACAAATGAATCATAAAATGGGAGGTGATTTAGAAAAAATTAGAGATGTGGGTAAATATTT 1047122 | ||| | ||||||| ||||||||||| ||||||| ||| | || |||||||| Sbjct 885 TATGCTCAATAAGAAAATGGATGGTGATTTAGAGAAAATTAAGGATCTTGGAAAATATTT 826 Query 1047123 CATTGAAGTATTTAAAGCATGTGGTATTAATATGTCTGGCACTAAATTTATCTGGGCTAG 1047182 |||||| | | |||||| || || ||| | || ||||||| | |||||| Sbjct 825 CATTGAGATCTGGAAAGCAGTCGGCATGAATTTATCAAATGTTAAATTTTTGTGGGCTTC 766 Query 1047183 TGAATTTTTTAATGATAATGCTACAAAATATTTTGAAAGAATGTTAC--ATATTGCTAAT 1047240 ||| ||||| | | ||| |||| | | | | |||| |||| | | | Sbjct 765 TGATGAAATTAATAAGAGAGCTGATGAATACT--GGAGCATGGTTATGGATATCTCCACT 708 Query 1047241 CAGAC-ATCTTTAGCACG-TGCTAAAAGATGTTGTCAAATTATGGGACGTAGAGAAGGTG 1047298 | | ||| | | | | || ||| ||| |||| | |||||| | || || Sbjct 707 AAATTTACCTTAAATAGGATCCTCAAA--TGTACTCAAGTCATGGGAAGAGCTGATGGAT 650 Query 1047299 ATGAATTATCTTCGTCACAAATTATATATCCTTGTATGCAAGTAGCAGATATTTTTGAAT 1047358 ||||| ||||| | || ||| | | || ||||| ||||||| |||||||||||| | Sbjct 649 ATGAACTATCTGCTTCTCAAGTATTCTACCCTTGCATGCAAGCAGCAGATATTTTCTTCT 590 Query 1047359 TAAATCCAAATGGAATTGATATTTGTCAACTTGGTGTTGATCAAAGAAAAGTTAATATGT 1047418 | || || ||| | || ||| | || | ||||||||||| || || ||| Sbjct 589 TGAAAGCAGATGTA---------TGCCAATTAGGAATGGATCAAAGAAAGGTCAACATGC 539 Query 1047419 TAGCCATTGAATATGCTAAACGTAATAATTTAAAAACACCAATTATTTTATCTCACCATA 1047478 | ||||||||||| ||| | ||||| | |||| ||| | ||| | ||||||| | Sbjct 538 TTGCCATTGAATACGCTGAGAAGAATAACCTTAAAAAGCCAGTAATTATCTCTCACCCAA 479 Query 1047479 TGTTAATGGGATTGA--AAGGTTCCAAAAATAAAATGAGTAAATCTGATCCTGAAAATGC 1047536 || |||||||||| | |||| | || ||||||||||||||||||||| || || Sbjct 478 TGGTAATGGGATTAAAGAAGGGGC--AAGCTAAAATGAGTAAATCTGATCCAGATTCAGC 421 Query 1047537 CATATTTATGGAAGA 1047551 ||| ||||||||||| Sbjct 420 CATCTTTATGGAAGA 406 >seq61502 Length=3714 Score = 145 bits (160), Expect = 6e-29 Identities = 185/251 (74%), Gaps = 8/251 (3%) Strand=Plus/Plus Query 368584 GATTGGTGTATTTCAAGAAGTAGGTTTTGGGGAACTCCAATTCCAGTATGGAAATCTGAT 368643 || |||||| | ||||||| || ||||||||| ||||| ||| | ||| |||||| Sbjct 1497 GACTGGTGTTTCTCAAGAAACAGACTTTGGGGAAACCCAATCCCAATCTGGGTCTCTGAT 1556 Query 368644 GATGGTGAAGAAATTGTTTGTATAGGTTCAATTAAAGAATTGCAAGAATTATCTGG-TGT 368702 ||||| |||||| |||| ||||| || || ||||| ||| | |||| ||||| || ||| Sbjct 1557 GATGGAGAAGAAGTTGTCTGTATTGGATCTATTAAGGAACTTGAAGATTTATCAGGATGT 1616 Query 368703 GCAAAATATTAGTGATTTACATATTGATAAAATTGATCACATTAAAATTCCATCAAAGAA 368762 | | || |||| ||||||||| | ||| |||||||| |||| || ||||| ||| | Sbjct 1617 G-ATAAAATTACTGATTTACACAGAGATTGTATTGATCATATTACTATCCCATCTAAGCA 1675 Query 368763 AGGAAA---AGGTTTATTGTCTCGAGTTGAAGGAGTTTTGGATTGCTGGTTTGAATCAGG 368819 |||||| || |||| | || | |||| || || ||||| |||||||| || || Sbjct 1676 AGGAAAGGGAGATTTAAAG---AGAATCGAAGAGGTATTTGATTGTTGGTTTGAGTCTGG 1732 Query 368820 TTCTATGCCTT 368830 |||||||| Sbjct 1733 AAGTATGCCTT 1743 >seq87644 Length=678 Score = 138 bits (152), Expect = 9e-27 Identities = 108/129 (84%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 563262 GAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATC 563321 ||| || |||||||||||| |||||| ||||||||| |||| || |||||| ||| Sbjct 362 GAGGACGAGATGAAGGGTAGATTCTTTCTGAATATTGTAGTCAGATAAGGTTCTTCCATC 303 Query 563322 TTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATC 563381 ||| | ||| ||||||||||| || | |||||| ||||| |||||||||||||||||||| Sbjct 302 TTCTAATTGCTTTCCGGCAAAGATTAATCTTTGTTGATCTGGAGGAATTCCTTCTTTATC 243 Query 563382 TTGAATTTT 563390 ||||||||| Sbjct 242 TTGAATTTT 234 >seq65898 Length=2326 Score = 131 bits (144), Expect = 1e-24 Identities = 270/397 (68%), Gaps = 16/397 (4%) Strand=Plus/Plus Query 552207 GTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGA 552266 || ||||||||||| || ||||| |||||| || || |||| |||| |||| ||||| Sbjct 1343 GTCAATCCAGATGAAGCAGTTGCTATTGGTGCTGCTATACAAGGAGCTGTTCTAACTGGA 1402 Query 552267 CAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGT 552326 | || | ||| || | |||| ||| |||||||||||| | ||| | ||| Sbjct 1403 GA---TGTT-AAAGACG------TTTTGTTGTTG--GATGTTACTCCTTTGTCTTTAGGT 1450 Query 552327 TTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGT 552386 | || || | |||||| | | |||| | || | ||||| || |||||||| Sbjct 1451 ATTGAGACTTTAGGAGGTGTATTCACTAGATTAATTCACAGAAACACCACTATTCCAACC 1510 Query 552387 AAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATT 552446 || ||||||| ||||| ||||| | ||||| || ||| || |||| | || Sbjct 1511 AAGAAATCTCAGGTATTCTCTACTGCCGCTGATAACCAGACTAAGGTAGGAATTAAGGTT 1570 Query 552447 TTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTT--GGTACTTTTAATTTAG 552504 | ||||||||||| || | || |||||||| ||||| || ||| | |||| Sbjct 1571 TACCAAGGAGAAAGAGAAATGGCTGCTGATAATAA--AACTTTGGGAGAATTTGAATTAG 1628 Query 552505 AAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATG 552564 ||| || || || || | ||| || ||||||||||||||||| ||||| |||| Sbjct 1629 GAGGAATCCCAATGGCCCCAAGAGGACACCCACAAATTGAAGTTACTTTTGATATTGATG 1688 Query 552565 CCAATGGAATTTTGAATGTGACTGCTTGTGATAAATC 552601 | ||| || | ||||| |||||| ||||||||| Sbjct 1689 CTTCTGGTATCGTAAATGTATCTGCTTCTGATAAATC 1725 >seq108602 Length=371 Score = 114 bits (126), Expect = 1e-19 Identities = 158/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 563254 CTGAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTT 563313 || || | ||| || | ||| || ||| |||||| ||| || ||||| | ||||||| Sbjct 127 CTAAGTCTGAGGACCAAATGGAGAGTAGATTCTTTTTGAATGTTATAATCTGATAGAGTT 186 Query 563314 CTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCT 563373 || ||||| | ||||||||| ||||| |||||||| || || || || |||||||| Sbjct 187 CTACCGTCTTCTAATTGTTTTCCAGCAAAGATAAGTCTCTGTTGGTCTGGTGGAATTCCC 246 Query 563374 TCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGA 563433 |||||||||||||| || || || || || || |||| || | || | Sbjct 247 TCTTTATCTTGAATCTTAGTCTTGACATTGTCGATGGTGTCAGATTGTTCAACATCTAAG 306 Query 563434 GTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 || | ||||| ||||||||||| ||||| || || ||||| Sbjct 307 GTGATGGTTTTTCCAGTAAGAGTCTTAACAAAGATCTGCAT 347 >seq65658 Length=2361 Score = 114 bits (126), Expect = 1e-19 Identities = 360/549 (66%), Gaps = 9/549 (2%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 || ||| ||||| ||| | || ||||| || ||||||||| | | | || || | Sbjct 1997 AGTTATCGGTATTGATCTTGGTACCACCTACTCATGTGTTGGTATCTTCAAGAACGGAAG 1938 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 ||||||||| ||| | ||||| ||||||||||| || ||||||| || |||||| Sbjct 1937 AGTTGAAATCATTCCAAATGAGTTAGGTAACAGAATCACCCCATCTTTCGTCGGTTTCAC 1878 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAA 550170 || ||| | || || || ||||| ||| ||||||| | | |||||| |||| Sbjct 1877 CGATGAAGAAAGACTTGTAGGAGAAGCAGCTAAAAATCAAGCAGCAGTTAATCCAACCAG 1818 Query 550171 TACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGC 550230 || ||| || || || | ||||||||||||| || || ||| | || || Sbjct 1817 ATCTGTTTATGTTGTAAAGAGATTAATTGGAAGAAACTTCAAGGATAAGGAGGTCCAAAG 1758 Query 550231 AGATATGAAGCATTGGC-CTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAG 550289 |||| || | | | | ||| | | |||||| | |||||| || || | ||| Sbjct 1757 AGATCGTAAAC-TCGTCTCTTACGATATTGTTGACAAGGGTGGAAAGCCATACGTCCAAG 1699 Query 550290 CT---ACTCATGAAGGATCTGTTAA-ACAATTTTCACCAGAACAAATTTCATCTATGGTT 550345 || | ||| ||| || || || | | || |||||| || | ||||| | Sbjct 1698 CTGAAGTTAATGGGGGAAAGGTCAAGACCA-TGTCTCCAGAAGAAGTCAGTGCTATGATC 1640 Query 550346 TTAATGAAAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGT 550404 || || || ||||| | | || || | | | || |||||||| | | |||| || Sbjct 1639 TTGATCAAGATGAAGGAGATCGCTGAGAAC-TACCTCGGACAAGAAGTCAAGAATGCTGT 1581 Query 550405 AATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACG 550464 || || || ||||| || || ||||| | ||| | || ||||| || ||||| Sbjct 1580 TATCACCGTTCCAGCTTACTTCAATGATGCTCAAAGAGCCGCCACTAAGGACGCTGGTGT 1521 Query 550465 TATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATA 550524 ||| | ||| | ||||| | | || |||||||||| ||||| ||||| |||| || Sbjct 1520 CATTTCAGGATTAAATGTATTGAGAATCCTCAATGAACCAACTGCCGCTGCTATTGCTTA 1461 Query 550525 TGGACTTGA 550533 |||||||| Sbjct 1460 CGGACTTGA 1452 Score = 104 bits (114), Expect = 2e-16 Identities = 380/588 (65%), Gaps = 24/588 (4%) Strand=Plus/Minus Query 552015 AGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAA 552074 || || | ||||||||| | ||| |||| | || | || || | ||||||| ||| Sbjct 1117 AGAGCTAGATTTGAAGAATTATGTAATGATTTATTCAAGAAGACTTTGAAACCAGTTGAA 1058 Query 552075 CAAGTTTTAAGAGATTCA--AAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTG 552132 |||| ||| | ||| || ||| || ||| | | |||| || || ||||| | Sbjct 1057 CAAGCTTTGAAAGACTCCGGAAGGAAGAAGAATGAGA--TTGATGAGATCGTACTTGTAG 1000 Query 552133 GTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAA 552192 | ||||| || ||||| || ||||| | || | | | ||| |||||||| ||| Sbjct 999 GAGGATCCACTAGAATCCCAAAAATCCAACAATTAATCAAAGATTACTTCAATGGAAAAG 940 Query 552193 AATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAG 552252 | ||| | | |||| |||||||| ||||| || ||||||||||| |||||| || Sbjct 939 AGCCAAACAGAGGAATTAACCCAGATGAAGCTGTCGCTTATGGTGCCGCCGTTCAAGGAG 880 Query 552253 CTATTCTTTCTGGACAA---ACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTA 552309 ||||| ||| || ||||||| ||| | | ||| | ||||| | |||||| Sbjct 879 GAATTCTCGGAGGAGAAGCCACTGATG-AAACCAAGGGAATCT--TACTTATTGATGTTT 823 Query 552310 CTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAA 552369 ||| | | | || | ||||| |||||||| |||||||||| | ||| ||| Sbjct 822 GTCCATTGACCTTAGGAATCGAAACCGTTGGAGGAGTTATGACTAAGATCATCCCAAGAG 763 Query 552370 ATACTACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTG 552429 || || || || ||||| | || | || || ||| || ||| Sbjct 762 GAACAGTCATCCCAACCAAGAAATCCCAGACTTTCACCACTTACCAAGACAACCAACAGA 703 Query 552430 CTGTTACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTG 552489 |||| ||||| || || |||||||||||| | |||||||| || | ||||| Sbjct 702 CTGTCACAATCAAAGCATTCGAAGGAGAAAGAGCCATGACTAAAGACAA----CCACTTG 647 Query 552490 GT-----ACTTTTAATTTA--GAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATT 552542 | |||| | | | ||| ||||| ||| || | ||||| || || || Sbjct 646 TTAGGAAACTTCGATCTCACTGAA---ATTCCAAATGCCCCAAGAGGAGTCCCACAGATC 590 Query 552543 GAAGTTACTTTCGATATCGATGCCAATGGAATTTTGAATGTGACTGCT 552590 |||| ||||||||||| |||| ||||| || || || || ||||| Sbjct 589 CAAGTAACTTTCGATATGGATGAGAATGGTATCTTAAACGTTTCTGCT 542 >seq59389 Length=9545 Score = 114 bits (126), Expect = 1e-19 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 550329 AAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAG 550388 |||||||| | ||| || | |||||||| |||| || | || |||| || | Sbjct 5718 AAATTTCAGCGATGATTCTTCAAAAAATGAAGAAAACGGCTGAGGATTACCTTGGACATG 5777 Query 550389 AAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTA 550448 ||||| | || |||||| | ||||| |||||||||||||| || || ||||||||||| | Sbjct 5778 AAGTTTCTGAAGCAGTAGTTACTGTTCCAGCATATTTTAACGATTCTCAACGTCAAGCAA 5837 Query 550449 CTAAAGATGCTGGACGTATTGCTGGACTTAATGTTC-TTCGTATTATCAATGAACCTACT 550507 | ||||| ||||| || || ||| |||| || |||||||||||||| || || Sbjct 5838 CGAAAGAAGCTGGTGAGATCGCAGGA-TTAACAATCAAACGTATTATCAATGAGCCAACA 5896 Query 550508 GCTGCTGCACTTGCATATGGACTTGATAAA 550537 || || ||| | || || ||| | |||||| Sbjct 5897 GCGGCGGCATTGGCTTACGGATTGGATAAA 5926 >seq62037 Length=3412 Score = 111 bits (122), Expect = 1e-18 Identities = 126/169 (75%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 367547 TTGGAAGATGGATTGACGTAAAAAATGAATATAAAACAATGGATACTAATTTCATGGAAT 367606 ||||||||||||||||| | ||||||| ||||| || ||||||| |||| ||||||| Sbjct 550 TTGGAAGATGGATTGACTTTGAAAATGATTATAAGACTATGGATATAAATTATATGGAAT 609 Query 367607 CTGTTATTTGGGCATTTAAACAATTATACGAACGCGGTATGATTTTTGAAGGTTATAAAG 367666 |||| | | ||||||||| | || ||| | | | | | | |||| | |||| Sbjct 610 CTGTATGGTATGTTTTTAAACAAATGTATGAAAAAGATTTAGTCTATAAAGGATCAAAAG 669 Query 367667 TAATGCCATATTCAACTGGTTGTAATACTGCTTTGTCACATTTTGAAGC 367715 | ||||| ||||||||| |||||||||| ||| || |||||||||| Sbjct 670 TTATGCCCTATTCAACTAAATGTAATACTGTTTTATCTAATTTTGAAGC 718 >seq105287 Length=395 Score = 109 bits (120), Expect = 4e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 550352 AAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACT 550411 |||||||| ||||||| | | | ||||| |||| ||||| || || ||||| || Sbjct 382 AAAATGAAGAAAACAGCAGAAGACTATCTTGGTGAAGAGGTTACTGAAGCGGTAATTACC 323 Query 550412 GTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCT 550471 || || || || ||||| || ||||||||||| |||||||||||||| ||||||||| Sbjct 322 GTGCCTGCTTACTTTAACGATAGTCAACGTCAAGCAACTAAAGATGCTGGCCGTATTGCT 263 Query 550472 GGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACTT 550531 || | | || ||||||||||| || || || || || || || || | ||| | Sbjct 262 GGTTTAGAAGTCAAACGTATTATCAACGAGCCAACAGCGGCGGCGCTAGCGTTTGGTTTA 203 Query 550532 GATAAACA 550539 || ||||| Sbjct 202 GACAAACA 195 >seq41074 Length=228 Score = 104 bits (114), Expect = 2e-16 Identities = 147/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 550297 TGAAGGATCTGTTAAACAATTTTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAAT 550356 ||||| | || |||| ||| |||||| || || | ||| | |||| |||||| Sbjct 203 TGAAGTAAATGGTAAAGCATTGTCACCACAAGAAGTGTCAGCACAAATTTTGC-GAAAAT 145 Query 550357 GAAACAAACAGCCAGT-GCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTAC 550415 ||| ||| | | | |||| | | ||| | |||||| || || || || ||||||| Sbjct 144 TAAAGAAAGATGCTGAAGCTTATTTAGGTGGAACAGTTACAGAGGCGGTTATTACTGTAC 85 Query 550416 CAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGAC 550475 | || ||||||||||| || || |||||||| ||||||||||| || ||||| || | Sbjct 84 CTGCTTATTTTAATGATTCTCAGCGTCAAGCAACTAAAGATGCGGGTAAAATTGCAGGGC 25 Query 550476 TTAATGTTCTTCGTATTATCAATG 550499 |||||||| |||||||| |||| Sbjct 24 TTAATGTTAAACGTATTATTAATG 1 >seq19544 Length=280 Score = 102 bits (112), Expect = 7e-16 Identities = 156/217 (72%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 563263 AGTACAAGATGAAGGGT--ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAAT 563320 ||||| | |||||| || ||| | ||| ||||||||||||| || |||||| || Sbjct 65 AGTACCAAATGAAGAGTGGACTCCTTCTGG--ATATTGTAATCAGATAAGGTTCTTCCAT 122 Query 563321 CTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTAT 563380 |||| | ||| ||||| ||||| || | |||||| ||||| || || || ||||| |||| Sbjct 123 CTTCTAATTGCTTTCCTGCAAAGATCAATCTTTGTTGATCTGGTGGGATACCTTCCTTAT 182 Query 563381 CTTGAATTTTTTGTTTTACTGCCTCAATTGTATC--AGTGTGAGTACATTCGAGAGTAAC 563438 ||||||| || ||||| ||||| ||||| | ||| | || || || |||| Sbjct 183 CTTGAATCTTAGTCTTTACATTATCAATAGTATCGGATTGTTCG-AC-GTCAAGGGTAAT 240 Query 563439 AGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || || ||||| | || || || || || |||||| Sbjct 241 GGTCTTTCCAGTCAAGGTCTTTACAAAGATCTGCATA 277 >seq60879 Length=4195 Score = 100 bits (110), Expect = 2e-15 Identities = 134/181 (74%), Gaps = 4/181 (2%) Strand=Plus/Minus Query 429292 TACATTCAATGGTTTTCC-CTTAAGTGGAAATACGCCATAATAATCTCGACCAATAACAT 429350 ||||||||| |||||| | ||| ||||||||| ||||||||||||| ||||| | Sbjct 1501 TACATTCAAAAATTTTCCTCGTAA-TGGAAATACACCATAATAATCTCTTCCAATCTCTG 1443 Query 429351 TTAGTCCAGACAT-TGCAAAAGTTTTAGCTGAATCTCCTTCCGTCAAAATAAGTGTACAT 429409 || |||| ||| ||||| || ||||||||| |||||||| || | || | |||||| Sbjct 1442 CAAGACCAG-CATCTGCAAGAGATTTAGCTGAGTCTCCTTCTGTAACTATTAAAGTACAT 1384 Query 429410 TTATATCCTTCTTTGGTACCAGCTTTGTGAGCATTATATAATTTTTCATATCTAATAGCT 429469 || | || |||| ||||||| | | ||||| || |||||| ||| | |||| || Sbjct 1383 TTTTCAGCTCCTTTTCTACCAGCCATATTAGCATCATCTAATTTATCAATACCAATAACT 1324 Query 429470 C 429470 | Sbjct 1323 C 1323 >seq70148 Length=1745 Score = 96.9 bits (106), Expect = 3e-14 Identities = 127/176 (72%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 930648 CCAAATAAAGTATTAATTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGA 930707 ||||| || | ||| ||||||| ||||| || || || || ||| | ||||| ||||| Sbjct 1267 CCAAAGAATATCTTAGTTGATTTCTCTTCTCCCAACATAGCTAAAAATATGCACGTTGGA 1208 Query 930708 CATTTGCGTTCTACCATTATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGT 930767 ||| | | || || ||||| ||||| | | |||||| | ||||| || || | Sbjct 1207 CATCTCAGATCGACTATTATCGGAGATAGTCTGTGTAGAGTTCTTGAATCTTTAGGCCAT 1148 Query 930768 AAAGTTCATCGAGTCAATCATATTGGTGATTGGGGAACACAATTTGGTATGTTAAT 930823 || || || || | |||||||| ||||||||||| || || ||||| ||| |||| Sbjct 1147 AATGTACACAGAATAAATCATATAGGTGATTGGGGGACTCAGTTTGGAATGCTAAT 1092 >seq59903 Length=6106 Score = 95.1 bits (104), Expect = 1e-13 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 550318 TTCACCAGAACAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTT 550377 ||| || | ||| ||||| | ||| || | | || |||||| |||| || |||| Sbjct 1838 TTCCCCTGCACAGATTTCTGCGATGATTCTGAACAAGATGAAAGAAACTGCAGAAGCTTA 1779 Query 550378 TGTTGGTCAAGAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACA 550437 | | || | ||||| | | || || || || || || ||||||||||| || | || Sbjct 1778 TCTCGGCGAGAAAGTTGAGCAGGCGGTTATTACGGTTCCTGCATATTTTAACGATGCGCA 1719 Query 550438 ACGTCAAGCTACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAA 550497 ||||| || || |||||||| || ||| | || ||| | || || || || ||||| Sbjct 1718 GCGTCAGGCCACAAAAGATGCCGGTAAAATTTCCGGCCTTGAAGTGCTCCGCATCATCAA 1659 Query 550498 TGAACCTACTGCTGCTGCACTTGCATATGGACTTGATAAA 550537 || || || || ||||| ||||| || || ||||||||| Sbjct 1658 CGAGCCAACCGCAGCTGCGCTTGCCTACGGCCTTGATAAA 1619 >seq14831 Length=294 Score = 95.1 bits (104), Expect = 1e-13 Identities = 88/111 (79%), Gaps = 2/111 (2%) Strand=Plus/Minus Query 563280 ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGC 563339 ||| | ||||| |||||||| || |||| |||||| ||||||||| |||||| || Sbjct 129 ACTCTTTTTGG--ATATTGTAGTCTGCTAAGGTTCTTCCATCTTCAAGGCATTTTCCTGC 72 Query 563340 AAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTT 563390 ||| || ||||| || || || ||||| || |||||||| ||||||||||| Sbjct 71 AAAGATCAGTCTCTGTTGGTCTGGAGGGATGCCTTCTTTGTCTTGAATTTT 21 >seq44811 Length=222 Score = 89.7 bits (98), Expect = 4e-12 Identities = 95/124 (77%), Gaps = 1/124 (1%) Strand=Plus/Plus Query 563267 CAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAA 563326 |||| || || ||| ||| || ||| ||||| || | |||||||| ||||| | Sbjct 67 CAAG-TGGAGAGTAGATTCCTTCTGAATGTTGTAGTCGGAGAGAGTTCTACCGTCTTCCA 125 Query 563327 GTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAA 563386 ||| ||||| ||||| ||||||||||| ||||| || |||||||||||||| || |||| Sbjct 126 ATTGCTTTCCAGCAAAGATAAGTCTTTGTTGATCTGGTGGAATTCCTTCTTTGTCCTGAA 185 Query 563387 TTTT 563390 | || Sbjct 186 TCTT 189 >seq94139 Length=510 Score = 87.8 bits (96), Expect = 1e-11 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 563284 TCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAA 563343 ||||| ||||||||||||| || |||||| |||||| | ||| ||||| ||||| Sbjct 152 TCTTTTCTAATATTGTAATCTGCAGCTGTTCTTCCATCTTCCAATTGCTTTCCACCAAAA 211 Query 563344 ATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCC 563403 | | |||||| ||||| || || ||||| || || |||||||| ||| | Sbjct 212 ACTAATCTTTGGCTATCAGCTGGGATACCTTCCTTTTCCTGAATTTTGGCTTTGATGTTA 271 Query 563404 TCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACG 563463 ||||| | || |||| | |||| || | ||||||||| || |||||||| || Sbjct 272 TCAATAGATTCGTTGTGTTCAACATCGACTGTGATAGTTTTACCTGTTAGAGTTTTTACA 331 Query 563464 AAAATTTGCAT 563474 || | |||||| Sbjct 332 AATACTTGCAT 342 >seq88500 Length=653 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/219 (70%), Gaps = 9/219 (4%) Strand=Plus/Plus Query 563280 ACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGC 563339 ||||||| || ||| ||||| |||| ||||||||| | |||| | | ||||| || Sbjct 395 ACTTTCTCTG--AATGTTGTAGTCAGAGAGAGTTCTTTCACCTTCTAACTATTTTCTCGC 452 Query 563340 AAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTAC 563399 ||| || | |||||| |||| || |||||| |||| || || ||||| || | ||| Sbjct 453 AAAGATCAATCTTTGTTGATTTGGTGGAATTTCTTCCTTGTCCTGAATCTTAGTCTCTAC 512 Query 563400 TGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTT 563459 ||||| |||| | || | || | | ||| |||||||||||| |||||| Sbjct 513 ATTATCAATACTATCTGATTGCTTGATATCTATAATAATAGTTTTACCAGTCTAAGTTTT 572 Query 563460 AACGAAA-ATTTGCATAGACATCTTGGTTATATAATATT 563497 || ||| |||||||| | || |||||| |||||| Sbjct 573 AAAAAAAGATTTGCAT-----TATT-GTTATAAAATATT 605 >seq80117 Length=1002 Score = 87.8 bits (96), Expect = 1e-11 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 563319 ATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTT 563378 |||||| | ||||||||| |||| ||||||||||| ||||| || ||||||||||| | Sbjct 365 ATCTTCTAATTGTTTTCCTCCAAATATAAGTCTTTGTTGATCTGGTGGAATTCCTTCCAT 424 Query 563379 ATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATC 563414 ||||||||| ||| ||||| || ||| ||||| Sbjct 425 ATCTTGAATATTTATTTTTAAATCCGAAATAGTATC 460 >seq73282 Length=1466 Score = 87.8 bits (96), Expect = 1e-11 Identities = 369/573 (64%), Gaps = 16/573 (3%) Strand=Plus/Minus Query 802852 ACAAGGACAGTATTATTGTTCAGTTGGTGGTAATAACTGTTTTGGAAGAGTCATGACAGA 802911 |||||| | || || |||||||| |||| | | ||| | |||||||| || | || Sbjct 882 ACAAGGTCCTTACTACTGTTCAGTAGGTGCCACCACCTGCTACGGAAGAGTAATTATGGA 823 Query 802912 TTTACATTTAGAAGCTTGTTTATATGCTGGTA---TTCATATCTCAGGTACGAATACAGA 802968 || |||| | ||||| | ||| | || | |||| || || || ||| ||| Sbjct 822 TTACCATTACAAGGCTTGCCT---TGCAGCTAAAGTAAATATTTCTGGAACCAATGGAGA 766 Query 802969 AGTAGCTCCTGGACAACATGAATTTCAAATTGGTCCTGTAGAAGGTATTGATGCTGCTGA 803028 ||| || || ||| || || ||| |||| ||| ||||| |||||| | ||| Sbjct 765 AGTTATGCCAGGTCAATGGGAGTTCCAAGTTGGCCCTTGTGAAGGAATTGATATAGGTGA 706 Query 803029 TCAACTTTGGATTGCGCGATATATTTTAGAAAAAATATCAGAAGATC---ATGGAAAATA 803085 ||| | ||||| || | ||| | |||| | | | | |||||| ||| | Sbjct 705 TCATTTATGGATAGCAAGGTATTTATTAGGTAGAGTCACCGAAGATTTCAATGTTGGACT 646 Query 803086 TATTGTTTATGATCCTAAACCTCTCAAAGGAGATTGGAATGGGAGTGGTTGTCATACTAA 803145 || |||| ||| |||||||| | ||| ||||||||||| ||| ||||||||||| Sbjct 645 TA--GTTT-TGAACCTAAACCATTAGCAGGTGATTGGAATGGAGCTGGATGTCATACTAA 589 Query 803146 TTTCAGTACTGAATCCATGAGATCAGATGGTGGTTATGATGTTATTATTGCAGTCATGGA 803205 |||| |||| | |||||| ||||| || | | | |||| || | || || Sbjct 588 TTTCTCTACTCTTGCAATGAGAGAGGATGGAGGATTAAAGGATATTCATGATGCAATTGA 529 Query 803206 CAAGCTTAAAAATAAACATCATGAACATATGGAAATATATGGTTCTAATAATCGTGATAG 803265 ||| | | || | |||| ||||||||| || | || ||||| ||| | || Sbjct 528 AAAGTTAGACAAAACTCATCTTGAACATATTAAATTGTACGGTTCGGGAAATGAGGCCAG 469 Query 803266 AATGTCTGGTCAACATGAAACATCAAGTTATG-ATGAATTTAATTATGGTATTGCTAGTC 803324 || | ||| |||||||||| | | |||| ||| || | | || | | | Sbjct 468 GCTGACAGGTAAACATGAAAC-TTGCGGTATGTCTGAGTTCAGGTGGGGAGTAGGAGATA 410 Query 803325 GAAAAGCTTCAGTTAGAATCCCCAGCGAAACAGTTGAAAATAAGAAA-GGATATTTTGAA 803383 || | ||| ||||||| || | ||| || | | |||| ||||| ||||| Sbjct 409 GAGGATGCTCAATTAGAATACCAACTTCAACTAATGCTGA-AGGAAAGGGATACTTTGAG 351 Query 803384 GACAGAAGACCCGCTGCTAATATTGATCCTTAT 803416 || |||||||| || | ||||||||||||||| Sbjct 350 GATAGAAGACCTGCCTCAAATATTGATCCTTAT 318 >seq90046 Length=613 Score = 86.0 bits (94), Expect = 5e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 865335 AAAGCAAAAGGACCATGCTTTAATGCAGCTGCAGAATAACCTTCTGCATGAATATAAGAT 865394 ||||| || || ||||||||||| || |||| | |||| |||| |||||||||||||| Sbjct 183 AAAGCCAATGGTCCATGCTTTAACTCACCTGCTGGATAAGCTTCCGCATGAATATAAGAA 242 Query 865395 ATTTCTTTTATTTTTAATGAACCTTCTTTAGCAAT 865429 ||||| |||| || |||| |||||| |||||| Sbjct 243 ATTTCCTTTAACTTCAATGCACCTTCCAAAGCAAT 277 >seq60106 Length=5404 Score = 86.0 bits (94), Expect = 5e-11 Identities = 132/186 (71%), Gaps = 2/186 (1%) Strand=Plus/Minus Query 390811 ATACCATTATCACCATATACACATTGAATTAATTTG-TCATTGGCATTTCTTACGGTACC 390869 || |||| |||||||||| ||||||| ||| || || | | ||||| || || || Sbjct 2832 ATTCCATCTTCACCATATAAGAATTGAAT-AATATGCTCCATTGAGTTTCTGACTGTTCC 2774 Query 390870 ATCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATAACCAGT 390929 |||||| | || ||| |||||||| || | | | |||| || ||||| || || Sbjct 2773 ATCATATTTGACCATAACATCTTCTAATGCCTTCTCAAGTCTTCTCTGAATATATCCTGT 2714 Query 390930 GTCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAAGAA 390989 || | || |||| || |||| ||| | ||||||||||||| |||| | |||||| | Sbjct 2713 TTCAGATGTCTTAACAGCTGTATCAATCAGACCTTCTCTTCCTCCCATTGCATGGAAGTA 2654 Query 390990 AAATTC 390995 ||||| Sbjct 2653 GAATTC 2648 >seq901 Length=361 Score = 86.0 bits (94), Expect = 5e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 550388 GAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCT 550447 ||| | || | ||| || || || || || || |||||| | || ||||||| ||||| Sbjct 120 GAATTAACTGGTGCTGTGATTACCGTGCCCGCTTATTTTGACGATGCACAACGCCAAGCG 179 Query 550448 ACTAAAGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACT 550507 || |||||||| | ||| ||||||| | |||| || ||| | |||| ||||| ||| Sbjct 180 ACCAAAGATGCCGCACGCCTTGCTGGCTTGCATGTGCTGCGTTTACTCAACGAACCAACT 239 Query 550508 GCTGCTGCACTTGCATATGG 550527 |||||||| | || ||||| Sbjct 240 GCTGCTGCTGTCGCTTATGG 259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4023523549964480