Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_016653.1 Length=46586 Score E Sequences producing significant alignments: (Bits) Value seq61560 84.2 7e-12 >seq61560 Length=3681 Score = 84.2 bits (92), Expect = 7e-12 Identities = 68/80 (85%), Gaps = 2/80 (3%) Strand=Plus/Plus Query 45158 TAGGGCACGTAGCTCAATTGGATAGAGCCCCGGTCTCCAAAGCCGGTGGTTGGGGGTTCG 45217 |||| || ||||||||||||| ||||| ||||||||||| ||| ||||||||||||| Sbjct 89 TAGGCCA-GTAGCTCAATTGGC-AGAGCGACGGTCTCCAAAACCGTAGGTTGGGGGTTCG 146 Query 45218 AGTCCCTCCGGGCCTGCAAC 45237 | ||||||| ||||||| || Sbjct 147 ATTCCCTCCTGGCCTGCCAC 166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148760529322752