Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_017969.1 Length=108853 Score E Sequences producing significant alignments: (Bits) Value seq95498 111 1e-19 >seq95498 Length=505 Score = 111 bits (122), Expect = 1e-19 Identities = 174/249 (70%), Gaps = 0/249 (0%) Strand=Plus/Minus Query 45197 TGCATACATGGACGTAAGCAACCTTTCGAGAACTCTCCAGGATTCCAGAAGGTTAGAATT 45256 |||||||| || | ||| || || | || || || ||||| | || |||| ||| Sbjct 503 TGCATACAAGGCCTTAAACAGCCCATATGAAATTCCCCCGGATTATAAAAACTTAGTATT 444 Query 45257 TCCCCACGATCATCAATGCCCTTCTTCAGGTTATGATAAATCTTGGCTAGTTGGTCAAAC 45316 || |||||||||||||||| || ||| ||||| || || | |||||| | Sbjct 443 TCTGCACGATCATCAATGCCTTTACTCAAGTTATCTACTATTTTCTGCAATTGGTCTATT 384 Query 45317 ATAAGACCATCGGAATTAGTCCACTGACGTCCTTGAACACCATAGACTCGTCCCATATCA 45376 | ||||| | |||| ||| ||| ||||||| |||||| || |||||||||||| Sbjct 383 GTGCCGCCATCAGGTTTAGCCCAAGCACGACCTTGAATACCATAAACCCGTCCCATATCA 324 Query 45377 TCCTCACCTTTGCGATATGGATTGTCTAGCCAAGCTAAGTTTTCATTTGCATTAGCATTC 45436 ||||||||||| || || | ||| | ||||| | ||| ||| ||||| |||| | Sbjct 323 TCCTCACCTTTACGGTAAGCATTATTGAGCCATACATCATTTAAATTAGCATTCGCATCC 264 Query 45437 CATGTGTTA 45445 ||||| ||| Sbjct 263 CATGTTTTA 255 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347741586636608