Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17]
109,152 sequences; 80,407,893 total letters
Query= NC_018269.1
Length=31766
Score E
Sequences producing significant alignments: (Bits) Value
seq81249 116 8e-22
seq101358 80.6 5e-11
>seq81249
Length=935
Score = 116 bits (128), Expect = 8e-22
Identities = 190/271 (70%), Gaps = 2/271 (1%)
Strand=Plus/Minus
Query 25073 AGAATTTAATTGTCCAATGATCGCGTTATCACAGCTTAACCGAGGTCTTGAAAACAGACA 25132
||| |||||||| || | ||||| |||||||||||| || ||| || | |||
Sbjct 611 AGAGTTTAATTGCCCTGTTATCGCACTATCACAGCTTAGTCGTAATCTAGAGAGTCGACC 552
Query 25133 GGATAAGCGCCCAATTAACTCAGACTTGCGCGAGTCTGGCGCGATAGAACAGGATGCTGA 25192
| || || || ||||| || || ||||| || ||||| ||||| || |||||||| ||
Sbjct 551 CAACAAACGGCCTATTAATTCTGATTTGCGTGAATCTGGTGCGATTGAGCAGGATGCCGA 492
Query 25193 TCTAATCGCATTGATATACCGAGACGAAGTGTATAACCCCGACAGCTCTGACAAAGGCAT 25252
| | || | || || || ||||| |||||||| ||| || || |||| || || ||
Sbjct 491 TGTTATTGTCTTTATCTATCGAGATGAAGTGTACAACGAAGAAAGTGCTGATAAGGGAAT 432
Query 25253 TGCCGAGATTATCATTGGCAAACACAGGAATGGCGAGCTAGGCACAGTGAGAGC-GGCAT 25311
|||||| || ||||| || || || || || || ||||||| || ||| ||||
Sbjct 431 TGCCGAAATAATCATCGGTAAGCAGAGAAACGGTCCCATAGGCAC-CTGTCAGCTAGCAT 373
Query 25312 TCATTGGGCAGTACACGCGATTTGAAAACCT 25342
| | || | || || || |||||||| ||
Sbjct 372 TTCTGGGTAAATATACCCGTTTTGAAAATCT 342
>seq101358
Length=430
Score = 80.6 bits (88), Expect = 5e-11
Identities = 91/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 25155 GACTTGCGCGAGTCTGGCGCGATAGAACAGGATGCTGATCTAATCGCATTGATATACCGA 25214
|| |||||||| |||||||| || || || ||||| ||| | || ||| || || |||
Sbjct 64 GATTTGCGCGAATCTGGCGCAATTGAGCAAGATGCCGATTTGATTTTATTTATCTATCGA 123
Query 25215 GACGAAGTGTATAACCCCGACAGCTCTGACAAAGGCATTGCCGAGATTATCATTGGCAAA 25274
|| || || ||||||||||| ||| || ||||||| || || ||||| | || |||
Sbjct 124 GATGAGGTTTATAACCCCGATAGCGAAGATAAAGGCACCGCAGAAATTATTGTCGGTAAA 183
Query 25275 CA 25276
||
Sbjct 184 CA 185
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 101397999363072
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |