Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq62696 114 2e-20 seq81472 89.7 9e-13 seq96190 84.2 4e-11 >seq62696 Length=3134 Score = 114 bits (126), Expect = 2e-20 Identities = 194/281 (69%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 168270 TAACCCTTGACGCACAACACCTGCTTGAGGGTGGCGACGATCTCCACCATTTCTTCCTGG 168329 ||||| || ||||| | | |||||| | ||| |||||||| |||| || | || Sbjct 350 TAACCTTTTACGCAAACGATCTGCTTTAAGGTATACACGATCTCAACCAAATCATTTTGT 291 Query 168330 GCCGCCATGACGAGTTCGATCGGCTTGTAAGCCTTCGGCGTCTCGTCGATCACGCCTTCG 168389 || ||||| || ||||| |||||||| |||| || ||||| ||||| || ||| Sbjct 290 GCGGCCATCACTTTGTCGATGTCTTTGTAAGCGCTCGGTGTTTCGTCAATCACACCCTCG 231 Query 168390 TCCTTGCGGCACTCGACGCCCTTCGTGGCTTCGACGTGCTCGTCCAGGGAGACGAGCTTC 168449 || || ||||| ||||| || ||||| |||||||| | ||| || ||| Sbjct 230 TCTACTCGACACTCAACGCCTTTAACAGCTTCCTTATGCTCGTCTAAGGAAACCGCTTTC 171 Query 168450 TTCGCCGCCGAACGCGACATGACGCGGCCGGCGCCGTGGCTGCACGAGCAGAAGGCGTCA 168509 || || || | ||| ||||| || || || || ||||||||||| ||| ||| || Sbjct 170 TTGGCTGCGGTACGTGACATAACTCGTCCCGCACCGTGGCTGCAGCTGCAAAAGCTTTCT 111 Query 168510 GCGTGGCCCTTGCCGCGCACGATGAACGACTTGGCGCCCAT 168550 ||| ||| ||||| |||||||| || | |||||||| Sbjct 110 TCGTTACCCAAACCGCGAACGATGAATGATCTAGCGCCCAT 70 >seq81472 Length=922 Score = 89.7 bits (98), Expect = 9e-13 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 132958 TTGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTT 133017 |||| ||||| |||||||| |||||||||||| ||||||||||| ||||||| |||| Sbjct 209 TTGACGCGGGATGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGCAGGTT 150 Query 133018 CAAATCCCTCCCCCGCATCCACAA 133041 ||||||| | |||||| ||| || Sbjct 149 CAAATCCTGCTCCCGCAACCAAAA 126 >seq96190 Length=494 Score = 84.2 bits (92), Expect = 4e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 132963 GCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCAAAT 133022 ||||| |||||||| |||||||||||| ||||||||||| ||||||| ||||||||| Sbjct 296 GCGGGATGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCAAAT 237 Query 133023 CCCTCCCCCGCATCCA 133038 || | |||||| ||| Sbjct 236 CCTACTCCCGCAACCA 221 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 894544216323840