Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq60251 82.4 8e-11 >seq60251 Length=5058 Score = 82.4 bits (90), Expect = 8e-11 Identities = 71/87 (82%), Gaps = 1/87 (1%) Strand=Plus/Minus Query 26911 TGCGCAAGTGGCGGAATTGGTAGACGCCCAGGTTTTAGGTACCTGTGCCCTAGTGGCGTG 26970 |||| |||||||||||||||||||||| | ||||||||||||| ||| || | |||||| Sbjct 1906 TGCGAAAGTGGCGGAATTGGTAGACGCGCTGGTTTTAGGTACCAGTG-TCTTGCGGCGTG 1848 Query 26971 AAGGTTCAAGTCCTTTCTTGCGCATCA 26997 | |||| |||| | ||| |||| || Sbjct 1847 AGAGTTCGAGTCTCTCCTTTCGCACCA 1821 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515775314688000