Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_019540.1 Length=49390 Score E Sequences producing significant alignments: (Bits) Value seq60251 82.4 2e-11 >seq60251 Length=5058 Score = 82.4 bits (90), Expect = 2e-11 Identities = 61/69 (88%), Gaps = 2/69 (3%) Strand=Plus/Minus Query 44196 CCCGTTAGTTCAATTGGATAGAGCAACGGCCTTCTAAGCCGTGAGTTACAGGTTCGAATC 44255 ||||| || |||| ||||||||||||| |||||||||||||| ||||||||||||| || Sbjct 2277 CCCGT-AGCTCAACTGGATAGAGCAACAGCCTTCTAAGCCGTAGGTTACAGGTTCGAGTC 2219 Query 44256 CTGTACGGG 44264 |||| |||| Sbjct 2218 CTGT-CGGG 2211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157721698958848