Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_020079.1 Length=147737 Score E Sequences producing significant alignments: (Bits) Value seq98545 107 2e-18 >seq98545 Length=462 Score = 107 bits (118), Expect = 2e-18 Identities = 187/272 (69%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 38720 TGTGTTCCTGTGTCAAGCCAAGTAAATCCTCGTCCGAGAACTTCCACTTGTAACTTCCTG 38779 || |||||||| || ||||||| | |||| || | ||||| |||||||| || | Sbjct 415 TGCGTTCCTGTATCTAGCCAAGCCATGCCTCTGCCCATGACTTCAACTTGTAAATTGCCA 356 Query 38780 TCTTCTAGGTAGCTGCGATTGATATCAGTGATCTCCAGTTCTCCACGCGCGGAAGGGGTT 38839 |||||| || | || || | ||| ||||| |||| ||| || || || ||||| | Sbjct 355 GCTTCTAAATAAATTCGGTTTAAATCGGTGATTTCCAATTCACCTCGTGCCGAAGGCTTC 296 Query 38840 ACTTCTAATGCACGTTGAATAACAGAGTTATCATAGAAATACAAACCTGTGACAGCATAA 38899 | | | || || | ||| | |||||| || ||||| | ||||| || |||||| Sbjct 295 AGATTTTTAGCCATTTCTACAACGGTGTTATCGTAAAAATAGAGGCCTGTTACTGCATAA 236 Query 38900 TCTGATTTAGGATTTTCAGGTTTCTCTTCAATAGAAATAGCTTGACGATTACTCCCAAAT 38959 ||| || || ||| ||||||| || || | ||| ||| || || | |||| Sbjct 235 CGTGACTTTGGTTTTGCAGGTTTTTCCTCTAAGCTAATCGCTACACCATCATCATCAAAC 176 Query 38960 TCAACCACACCGAATCGTTCAGGATCTTTCAC 38991 ||||| ||||| ||||||||||||| | ||| Sbjct 175 TCAACAACACCATATCGTTCAGGATCATGCAC 144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471985543082240