Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_020080.1 Length=174413 Score E Sequences producing significant alignments: (Bits) Value seq60379 91.5 2e-13 >seq60379 Length=4852 Score = 91.5 bits (100), Expect = 2e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 39389 GCATGGAACCCTGTTGATCTTGATGATATGGCATTGCGTCCGTGTCACTGTTTCTTTCAG 39448 || |||||||||| | | || || ||||| |||| || ||||| ||| | |||||| Sbjct 1669 GCTTGGAACCCTGCTCTGGTAGACGAGATGGCTTTGCCGCCATGTCATTGTCTGTTTCAG 1610 Query 39449 TTCGTTGTAATCAACGGTAAACTGTCTCTACAGTGGTATCAGCGTTCAGTTGATGTCTTC 39508 || ||| |||| || || || ||| ||||||||||| | ||| |||| Sbjct 1609 TTTTATGTCGCGGACGGCAAGCTTTCATGCCAGCTCTATCAGCGTTCGGCGGATATCTTT 1550 Query 39509 TTAGGGTTGCCGTTCAATATCGCCTCCTATGCTCTCCTGACGCATATTATCGC 39561 ||||| |||| ||||||||||| |||||||| || || ||||| || || || Sbjct 1549 TTAGGTGTGCCATTCAATATCGCGTCCTATGCGCTTCTTACGCACATGATTGC 1497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557232273532160