Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_020877.1 Length=131332 Score E Sequences producing significant alignments: (Bits) Value seq37096 96.9 3e-15 >seq37096 Length=236 Score = 96.9 bits (106), Expect = 3e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 63064 GCAGTAAAGACTTTCTGGGGTGACCTATATCATAGAATGCCTAAATGGGAAACTGGAGCT 63123 || ||||| |||| ||||| || |||| || |||||||| ||| |||| ||| ||| Sbjct 236 GCCGTAAAATCTTTTTGGGGCGATTTATACCACAGAATGCCCAAACCCGAAATTGGCGCT 177 Query 63124 GTGGGTGCAACTTTTAGTGAGAGTGAAGCACGTCATGCCGACGCTTATTCACATTTATTA 63183 |||||| | || ||| || ||||||| ||| |||||||| || || |||||| | | Sbjct 176 GTGGGTTCTACCTTTGCCGAAAGTGAAGTACGCCATGCCGATGCATACTCACATCTTCTT 117 Query 63184 GAGATTTTAGGTTTGAATGAGGAGTTTAAAACA 63216 || ||| | || | || ||||||||||| || Sbjct 116 GAAATTCTTGGACTAAACAAGGAGTTTAAAGCA 84 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419578695152096