Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_021804.1 Length=28760 Score E Sequences producing significant alignments: (Bits) Value seq7412 111 3e-20 >seq7412 Length=326 Score = 111 bits (122), Expect = 3e-20 Identities = 127/171 (74%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 26499 GCTAAAGAACTGCAGGTGCCTATAATTGCTTTATGTCAATTATCTAGGGCTGTAGAAACT 26558 || |||||| || | | ||| |||| || ||| ||||||||| | || |||||||| Sbjct 107 GCAAAAGAATTGGCGATTCCTGTAATCGCACTATCACAATTATCTCGTGCAGTAGAAACC 166 Query 26559 CGTGGTGGTTCTAAACGTCCTTTGTTATCAGATTTGCGTGAATCAGGTGCAATAGAGCAG 26618 ||||| || |||||||| || ||| || | |||||||| ||||| || ||||| Sbjct 167 CGTGGAGGAAGCAAACGTCCATTATTAAGTGACCTTCGTGAATCTGGTGCGATTGAGCAA 226 Query 26619 GATGCAGATATAGTAGAGTTTATTTATAGACCAGATTATTATAAAATAGAA 26669 ||||||||||| ||| ||||| || | ||||| ||||| ||||| ||| Sbjct 227 GATGCAGATATTGTAAGCTTTATCTACCGTCCAGAATATTACAAAATTGAA 277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 91791267577728