Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Euplotes_20focardii_20[genbank_20GCA_5F001880345.1_202016-11-17] 109,152 sequences; 80,407,893 total letters Query= NC_022764.1 Length=39874 Score E Sequences producing significant alignments: (Bits) Value seq89519 98.7 3e-16 >seq89519 Length=626 Score = 98.7 bits (108), Expect = 3e-16 Identities = 111/146 (76%), Gaps = 2/146 (1%) Strand=Plus/Plus Query 223 TAGAACATGGCTAGATTAACACCTAAGCAACAAATGTTTGTTAAAGAGTATCTAATTGAC 282 || || |||| || | | || ||||| ||| |||||||||||||||||||| |||||| Sbjct 93 TAAAAAATGGTTAAACTCACGCCTAAACAAGCCATGTTTGTTAAAGAGTATCTTATTGAC 152 Query 283 TTGAACGCAACACAAGCGGCTTTACGTGCTGGCTATAGTGCAAAG-ACCGCTAAACAAAC 341 || ||||||||||| || ||| | |||||||| |||||| || || | ||| | ||| Sbjct 153 TTAAACGCAACACAGGCCGCTATTCGTGCTGGATATAGT-CAGAGAAACGCAGACAAAAT 211 Query 342 AGGCACAGAGAACCTATCTAAACCTA 367 ||| ||||| ||| |||| ||| Sbjct 212 AGGTTCAGAGTTGCTAGGTAAAACTA 237 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127309969195264